Protein Model on 7zh5_B_1_A_1
(TEMPLATE: 
7zh5
)Protein Model on 7zh5_B_1_A_1
(TEMPLATE: 7zh5
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DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(SPIKE_SARS) | B 1 (B) | polymer(polypeptide(L)) [926 aa] | Spike glycoprotein,Fibritin :SPIKE_SARS:WAC_BPT4 | |
| 2 | b | A 1 (A) | polymer(polypeptide(L)) [904 aa] | Spike glycoprotein,Fibritin :SPIKE_SARS:WAC_BPT4 | 301Q 304N 306R 369V 370S 373K 383Y 417M 449R 451F 452E 453R 455I 458V 502E 533T 544R 545F 546Q 548F 549Q 550Q 551F 552G 553R 555V 556S 557D 558F 572D 573I 575P 576C 578F 600D 601V 651P 653G 654A 655G 679M 681L 683A 684D 685S 686S 687I 689Y 690S 691N 693T 694I 695A 697P 939Q 943T 947Q 950S 951N 977R 988T 999E 1021R 1022V 1023D 1027K 1028G 1054E 1056N 1059T 1061P 1071F 1072P 1076V 1089R 1103F 1105S 1110V 1111V 1112I (identity: 100.0 %/90.2 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:7zh5_B_1 identity=90.2% |
queryA 31:TQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACNF: 130
:**************************************** **************************** ***************:
7zh5_B_1 18:TQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHXXXXXXXNPVIPFKDGIYFAATEKSNVVRGWVFGSXXXXXXXXXXIINNSTNVVIRACNF: 117
SecStr : EEESB B S S EEEEEEEE TTEEE B ------- EE SS EEEEE SS TT EEEE ---------- B SSSS B S :
ExpBur :eeeebbeebbeeeeeeebeeeeeebeeebbbbeeebebee-------eeebebeebbbebeeeeeeebbbeeeee----------eeeeeeeeeeeeeee:
queryA 131:ELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVR-----------------------: 207
:*************** :
7zh5_B_1 118:ELCDNPFFAVSKPMG--------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXX: 155
SecStr : SS TTT -------------------------------------------------------------------------------------:
ExpBur :eeeeeeeeeeeeeee-------------------------------------------------------------------------------------:
queryA 208:---------------------------------------DLPSGFNTLKPIFKLPLGINITNFRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDE: 268
: ***************************** *******************:
7zh5_B_1 156:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLPSGFNTLKPIFKLPLGINITNFRAILTXXXXXXXXXXXXXAAYFVGYLKPTTFMLKYDE: 255
SecStr :--------------------------------------- SB B EEEE ------------- EEEEE EEEEEEEEE T:
ExpBur :---------------------------------------ebeeeeeeeeeeeeeeeeeeeeebebbee-------------ebbbbbebeebebbbebee:
queryA 269:NGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYG: 368
:****************************************************************************************************:
7zh5_B_1 256:NGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYG: 355
SecStr :TS EEEEEETTS HHHHHHHHHT S SEEEEEEEEEB B S B THHHHT S BTTS EEEEE S B S HHHH SEEEESS:
ExpBur :ebebeebbbbebebbbbbbbeeeeeebeebeeebeebebeeebebebbeeeeeebebeebbeeeebebbebbeeeebeebbbebeebeeeeeeeeeebee:
Contact : b b b
queryA 369:VSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCT: 468
:*********************************************************** ************************ :
7zh5_B_1 356:VSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNXXXXXXXXXXXKYRYLRHGKLRPFERDISNVPFSPXXXXXX: 455
SecStr :S GGGGGG BSSEEEEEEEE SSGGGGSSSS HHHHHT SS EEEEEEE ----------- SS TT ------:
ExpBur :bebeebeeebbbbbebbbbebeeeebeebbeeeeeebbbebbebeeebebbbbbbeeee-----------eebeebeeebeeeeeeeeeeeeee------:
Contact :bb b b b b bbb b b
queryA 469:PPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTS: 568
: ****************************************************************************:
7zh5_B_1 456:XXXXXXXXXXXXXXXXXXXXXXXXPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTS: 555
SecStr :------------------------ EEEEEEE SSSS BB S SS EEEBSSS EEE B TT B TTS EEETTTE:
ExpBur :------------------------eebbbbbbbeeeeeebbbbbeeeeeeeeeeebbebbbeebeeebbbeeeeeebeeeebeeeeeeeeebbbebeeee:
Contact : b b bbb bbbbbb bbbb
queryA 569:EILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRS: 668
:********************************************************************************************** :
7zh5_B_1 556:EILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTXXXXXX: 655
SecStr :EE EEEEEEEES SSS S EEEEESS SSHHHHHHHTT BSS SS S EEEETTEEEES EE S B SEEETTTEEEE ------:
ExpBur :ebebeeeebebbbbbbbbbbeeeeebbbbbeebebeebbebbeeeebebebeeeebeeeeeebeebbbbebbeeeeeeebebebeeebbbbebe------:
Contact : bb bb b bb b bbb
queryA 669:TSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVK: 768
: ************************************************************************************************:
7zh5_B_1 656:XXXXSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVK: 755
SecStr :---- EEEEB SS EEEE EEEEEEEEEE EEEE HHHHH SS HHHHHHHHTT SSHHHHHHHHHHHHHHHHHHHHHHHTT S:
ExpBur :----ebbbbeeeeeeeeeeeeeeeeeebbeebebebeeebbbbbbebbebebeebbbeeeeebbebbeeeeeeeeebeeebeebbebbeebbeebbeebe:
Contact : b b bbbbb bbb bbb b
queryA 769:QMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMKQYGECLGDINARDLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGW: 868
:******************************************* *************************************:
7zh5_B_1 756:QMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLAXXXXXXXXXXXXXXXXXXXXICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGW: 855
SecStr :S S EETTEE TTTS TTSSSSS HHHHHHHHHS -------------------- TT EEEE SS HHHHHHHHHHHHHHHHSS S:
ExpBur :eeeeeeeebebebbebeebbeeeeeeeeebebbebbbeebeee--------------------eeeeeeebbeeeeeeeeeeebbeebbbbbbbbbebbe:
queryA 869:TFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDK: 968
:****************************************************************************************************:
7zh5_B_1 856:TFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDK: 955
SecStr : SSS SHHHHHHHHTTTT THHHHHTHHHHHHHHHHHHHHHHHHHHT S S HHHHHHHHHHHHHHHHHHHGGG SSSS SSSSSSSSSSTT:
ExpBur :ebeeeeeeeeebeebbbebbeebebeeebbeeeeeebbeebeebbeebeeebeeeeeebeebeebbeebeebeeebeeeeeeeeebeeeebeebeeebee:
Contact : b b b bb
queryA 969:VEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGK:1068
:****************************************************************************************************:
7zh5_B_1 956:VEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGK:1055
SecStr :TSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSS STTSSSSSS EEEEEEETTEEEEEEEEEE EEEE S EESSSE:
ExpBur :eebeeebeebbebbbebbeebbeebeeebeebeeebeebbebbeebbbbbbeeeebbbeeebbbbbbbbbeebbbbbbbbbeeeeeeebebbebbbeeee:
Contact : b b b bbb bb b b b b
queryA 1069:AYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTV:1119
:***************************************************:
7zh5_B_1 1056:AYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTV:1106
SecStr :EEEESS EEE TTTS EEE SSS STTEEEEEETTTSSS EE :
ExpBur :bbeeeebbbbeeeeebebbbeebeeeeebeeeebeeeeeeeeeeeeeeeee:
Contact : bb b b b b bbb
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[assembly_id:1]
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