Protein Model on 6acc_C_1 (TEMPLATE: 6acc )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description
1 a A(SPIKE_SARS) C 1 (C) polymer(polypeptide(L)) [1065 aa] Spike glycoprotein :SPIKE_CVHSA
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6acc_C_1 identity=96.6%
queryA        18:RCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIII: 117
                :****************************************************************************************************:
6acc_C_1      18:RCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIII: 117
SecStr          :     S       EEEE TT   B SSS    S EEEEEEEE  TT EEEEEEE SS      EE  S EEEEEEESS     EEEESSSSTTSEEEEEE:    
ExpBur          :eebeeeeeeeeeeeebebbebbbbbbeeeeeeeeeeebeebbbbbebebebbebeeebbbbeebebeebbbbbbbbbbbbbbbbbbbbebeeebebbbbb:    

queryA       118:NNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLK: 217
                :****************************************************************************************************:
6acc_C_1     118:NNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLK: 217
SecStr          :E SSSEEEEEEE    S   EEE SSS   TT        S  EEEE        S   SS  EEEEEEEEEETTEEEEEE B     SSS       BE:    
ExpBur          :beeebbbbebbbbebbebbbbebeeeebebeeebbeeeeeeeeeeeebeeeebebeeeeeebeebbbbbbbeeeeebbbbebeeebeeeeebeeeebbbe:    

queryA       218:PIFKLPLGINITNFRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFP: 317
                :**********************    **************************************************************************:
6acc_C_1     218:PIFKLPLGINITNFRAILTAFSXXXXIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFP: 317
SecStr          :EEEEE       EEEE  EEE ----     SEEEEEEE EEEEEEEEE SSS EEEEEESSS HHHHHHHHHT SS  SEEEE    BB     EE   :    
ExpBur          :eebebebebebeebbbbbbbbe----ebbbbebbbbbbebeebebbbebbeeeebeebbbbebebbbbbebeeeeeebeebeeebeebebeeebebbbbb:    

queryA       318:NITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFM: 417
                :****************************************************************************************************:
6acc_C_1     318:NITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFM: 417
SecStr          :S   B THHHHSS S    STT EEEEE S B    TTTS S  SEEEESSS STTGGG  BSSEEEEEEEE SSGGGG SSS  TTTTTTS    SSS :    
ExpBur          :eeeeebebeebbeeeebebbeebeeeebeebebebeebeeeeebeeeebeeeeeeebeeebbbbbebbbbbbebebbeebeeeeeeebbbebbbbbeeeb:    

queryA       418:GCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLST: 517
                :****************************************************************************************************:
6acc_C_1     418:GCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLST: 517
SecStr          : EEEEEE TTTT  TT     EEE   SS   TT          TTS    TTSTT   SEEE    SSS GGGS EEEEEEE    SSS  BB S    :    
ExpBur          :bbbbbbbbeeebbeeeebeeeebbeebeeebeeeeeeeeeeebbeeeeebeeeeeebeebeeebebeeeeeeeebbbbbbbbbbeebeeebbbbbeeeee:    

queryA       518:DLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTP: 617
                :****************************************************************************************************:
6acc_C_1     518:DLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTP: 617
SecStr          :   TTSEEEEE SS EEEEEEEE      TT  B   TTS   BB BTTTB EEEE   SB   EEEE  SSS    EEE  S  SSHHHHHHHTT BSS:    
ExpBur          :eeeeeebbebbbbeeeeebbbbeeeeebeeeeeebeeeeeeeebbebeeeeebebeeebbeebbbbbbbbeeeeeebbbbbeebebeebeebbeeeebeb:    

queryA       618:AWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTS: 717
                :*******************************************             ********************************************:
6acc_C_1     618:AWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYXXXXXXXXXXXXXIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTS: 717
SecStr          :  SS   S EE  SSS  EES B  SS    SEE SSS EE  ------------- BEE    S        SS B      EEEEEEEEE      EE:    
ExpBur          :ebeeeebeeebeeeeebbbbebeeeeeeeeeebebeeebbbbe-------------ebbbeeeeeeeeeeeeeeeeeebebebebebeeebbbbbbbbbe:    

queryA       718:VDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMK: 817
                :**********************************************************************************************      :
6acc_C_1     718:VDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLAXXXXXX: 817
SecStr          :E TTTSSS S SSHHHHHHTT SHHHHHHHHHHHHHHHHHHHHHHHT   SS     S   STT   TTTS  TTSSSSS HHHHHHHHH    ------:    
ExpBur          :bebeebbbeeeeebeebbeeeeeebeebeeebeebbeebeebbeebbeebeeeeeeeeebeeebbebeebbbeeeeeeebbebbebbeeebeee------:    

queryA       818:QYGECLGDINARDLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQ: 917
                :              **************************************************************************************:
6acc_C_1     818:XXXXXXXXXXXXXXICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQ: 917
SecStr          :--------------     TTSEEE   SS HHHHHHHHHHHHHHHHSS S  SSSS     SHHHHHHGGGSSS  THHHHHSHHHHHHHHHHHHHHHH:    
ExpBur          :--------------eeeeeeebbeeeeeebeeeebbebbbbbbbbbbebbeebeeeebeeeebeebbbebbeebebeeebbeeeeeebbeebbebbeebb:    

queryA       918:ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG:1017
                :****************************************************************************************************:
6acc_C_1     918:ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG:1017
SecStr          :HHHHS  STTHHHHHHHHHHHHHHHHHHHHHHS SSSSSSSTTTHHHH  STHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTS:    
ExpBur          :eebeeeeeebeebeebbeebbeeeeebeeebeeeeebeeeebeebeeeeeeeebeebbeebbebbbebbeebbeebeeebeebeebbeebbebbeebbbb:    

queryA      1018:QSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINN:1117
                :****************************************************************************************************:
6acc_C_1    1018:QSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINN:1117
SecStr          :   STTTSSSSS  EEEEEEETTEEEEEEEEEE      B B SSEESSSSEEE  SS  EETTTT EE  SSS   EE  STT EEES TTS SS    :    
ExpBur          :bbeeeebbeebebbbbbbbbbbebbbbbbbbbeeeeeeeeebbebbbeeeebbebeeeebbbbbeeeebbeebbebeeebeeebbeeeeeeeeeebebee:    

queryA      1118:TV:1119
                :**:
6acc_C_1    1118:TV:1119
SecStr          :  :    
ExpBur          :be:

Input Residue Numbers for Focused Sites

ex) 2,15,123