[pdbjlvh2]Protein Model on 8iho_B_1_D

#WARNING:no index is registered index "YP_009725299.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725299.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 8iho_B_1_D_1

Protein Model on 8iho_B_1_D_1 (TEMPLATE: 8iho )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(queryA)	B 1 (C)	polymer(polypeptide(L)) [307 aa]	Papain-like protease nsp3 :R1A_SARS2
2	b		D 1 (E)	polymer(polypeptide(L)) [4 aa]	covalent inhibitor	851W 854N 856C 857Y 907L 908G 909D 992P 993P 1009Y 1012N 1013Y 1015C 1016G 1017H 1018Y (identity: 100.0 %/98.7 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:8iho_B_1 identity=98.7%

queryA       749:TIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLTS: 848
                :*********************    ***************************************************************************:
8iho_B_1       5:TIKVFTTVDNINLHTQVVDMSXXXXQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLTS: 104
SecStr          : EEEEEESSSSS EEEEE   ----  SSSEEETTEE SS    GGGTT EEEE   SHHHHHHHHHHHS   THHHHHHHHHHHHHTTS   EETTEE :    
ExpBur          :ebebebbbbeeeeeeeeeeee----eeeeebbbebeebeeeeeeeebeeeebbbbeeeeebbeebeebbeeeeeebbeebbebbeebeebebeebeebbb:    

queryA       849:IKWADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGVE: 948
                :****************************************************************************************************:
8iho_B_1     105:IKWADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGVE: 204
SecStr          :    TTTHHHHHHHHHHTTS   BSSHHHHHHHHHHHTT  HHHHHHHHHHTT  TT    HHHHHHHHHHTB  TT EEEEEEEETTTEEEEEEEEGGG:    
ExpBur          :beebeebbbbbbbbbbbbebebebebebbeebbeebeeeebbebbbbbbbbbebebeeeeebeebbeebbeebebeebebbbbbebeeeeeeeeeeebbe:    
Contact         :  b  b bb                                                 bbb                                       

queryA       949:AVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPITDV:1048
                :****************************************************************************************************:
8iho_B_1     205:AVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPITDV: 304
SecStr          :GSEEES S HHHHHH EEEE TTSSEEEEEEEEEESSEEEEEEEEEEEEE TTS SEEEEEEE SSSEEEEEEEESSSEEEE SS EEEESSEEEEEEEE:    
ExpBur          :bbebeebbbbeebbeebebeeeeeeebeebbbebebebbbbbbeeeeeebeeeebbbbbbbeeeeeeeebebbbbbebbbbbebeeeeeeeebebbbbbb:    
Contact         :                                           bb               b  bb bbbb                              

queryA      1049:FYKENSYTTTI:1059
                :***********:
8iho_B_1     305:FYKENSYTTTI: 315
SecStr          :EEE SEEE   :    
ExpBur          :bbebeebebee:

Protein Model on 8iho_B_1_D_1 (TEMPLATE: 8iho )

Input Residue Numbers for Focused Sites