#WARNING:no index is registered index "YP_009725299.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725299.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7uv5_A_1_B_1

Protein Model on 7uv5_A_1_B_1 (TEMPLATE: 7uv5 )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) A 1 (A) polymer(polypeptide(L)) [312 aa] Papain-like protease nsp3 :R1A_SARS2
2 b B 1 (B) polymer(polypeptide(L)) [76 aa] Ubiquitin :UBC_HUMAN 851W 854N 855N 856C(S) 857Y 907L 908G 909D 911R 912E 944L 948E 952Y 953M 968P 970T 977K 992P 993P 1009Y 1013Y 1014Q 1015C 1016G 1017H 1018Y 1046T (identity: 96.3 %/99.4 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7uv5_A_1 identity=99.4%
queryA       749:TIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLTS: 848
                :****************************************************************************************************:
7uv5_A_1       7:TIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLTS: 106
SecStr          : EEEEEESSSSS EEEEE TTS HHHHHSSEEETTEE TT    GGGTT EEEE   SHHHHHHHHHHHS   TTHHHHHHHHHHHHTTS   EETTEE :    
ExpBur          :ebebbbbbbeeeeeeeebeeeebbeeebeebbbebeebbeeebeeebeeeebbbeeeeeebeebbeebbeeeeeebbeebbebbeebeebebeebeebbb:    

queryA       849:IKWADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGVE: 948
                :******* ********************************************************************************************:
7uv5_A_1     107:IKWADNNSYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGVE: 206
SecStr          :  S TT HHHHHHHHHHTTS   BSSHHHHHHHHHHHTT  HHHHHHHHHHHT  TT    HHHHHHHHHTTB  TT EEEEEEEETTTEEEEEEEEGGG:    
ExpBur          :beeeeebbbbbbbbbbbbebeeebebebbeebbeebeeeebbbbbbbbbbbbebebeeeeebeebbeebbeebebeebebbbbbebeeeeeeeeeeebbe:    
Contact         :  b  bbbb                                                 bbb bb                               b   b

queryA       949:AVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPITDV:1048
                :********************************************************************************** *****************:
7uv5_A_1     207:AVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCINGALLTKSSEYKGPITDV: 306
SecStr          :GTEEES S HHHHHH EEEE TTSSEEEEEEEEEESSEEEEEEEEEEEEE TTS SEEEEEEE SSSEEEEEEEESSSEEEEETTEEEEES EEEEEEEE:    
ExpBur          :bbbeeebbebeebbebbeeebeeeeebeebbbebebebbbbbbeeeeeebeeeebebbbbbeeeeeeeebebbbbeeebbbbebeeeeeeeebebbbbbb:    
Contact         :   bb              b b      b              bb               b   bbbbbb                           b  

queryA      1049:FYKENSYTTTIK:1060
                :************:
7uv5_A_1     307:FYKENSYTTTIK: 318
SecStr          :EEE SEEE    :    
ExpBur          :bbebeebebeee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123