#WARNING:no index is registered index "YP_009725299.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725299.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7rbr_A_1_B_1

Protein Model on 7rbr_A_1_B_1 (TEMPLATE: 7rbr )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) A 1 (A) polymer(polypeptide(L)) [313 aa] Papain-like protease :R1A_SARS2
2 b B 1 (B) polymer(polypeptide(L)) [76 aa] Ubiquitin :UBB_HUMAN 851W 854N 856C(S) 857Y 907L 908G 909D 911R 912E 944L 948E 952Y 953M 968P 970T 977K 992P 993P 1009Y 1013Y 1014Q 1015C 1016G 1017H 1018Y 1046T (identity: 96.2 %/99.7 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7rbr_A_1 identity=99.7%
queryA       748:RTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLT: 847
                :****************************************************************************************************:
7rbr_A_1       6:RTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLT: 105
SecStr          : EEEEEEESSSSS EEEEEETTS HHHHHSSEEETTEE TT    GGGTT EEEE   SHHHHHHHHHHH    TTHHHHHHHHHHHHTTS   EETTEE:    
ExpBur          :eebebbbbbbeeeeeeeebebeebbeeebeebbbebeebbeeebeeebeeeebbbeeeeeebeebbeebbeeeeeebbbebbebbeebeebebeebeebb:    

queryA       848:SIKWADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGV: 947
                :******** *******************************************************************************************:
7rbr_A_1     106:SIKWADNNSYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGV: 205
SecStr          :   S TT HHHHHHHHHHTTS   BSSHHHHHHHHHHHTT  HHHHHHHHHHHT  TT    HHHHHHHHHTTB  TT EEEEEEEETTTEEEEEEEEGG:    
ExpBur          :bbeeeeebbbbbbbbbbbbbbeeebebebbeebbeebeeeebbebbbbbbbbbebebeeeeebeebbeebbeebebeebebbbbbebeeeeeeeeeeebb:    
Contact         :   b  b bb                                                 bbb bb                               b   

queryA       948:EAVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPITD:1047
                :****************************************************************************************************:
7rbr_A_1     206:EAVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPITD: 305
SecStr          :GGTEEES S HHHHHH EEEE TTSSEEEEEEEEEESSEEEEEEEEEEEEE TTS SEEEEEEE SS EEEEEEEESSSEEEEETTEEEEES EEEEEEE:    
ExpBur          :ebbbbeebbbbeebbebbeeebeeeeebeebbbebebebbbbbbeeeeeebeeeebbbbbbbeeeeeeeebebbbbeeebbbbebeeeeeeeebebbbbb:    
Contact         :b   bb              b b      b              bb               b   bbbbbb                           b 

queryA      1048:VFYKENSYTTTIK:1060
                :*************:
7rbr_A_1     306:VFYKENSYTTTIK: 318
SecStr          :EEEE SEEE    :    
ExpBur          :bbbebeeeebeee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123