#WARNING:no index is registered index "YP_009725299.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725299.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 6yva_A_1

Protein Model on 6yva_A_1 (TEMPLATE: 6yva )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description
1 a A(queryA) A 1 (A) polymer(polypeptide(L)) [283 aa] Replicase polyprotein 1a :R1A_SARS2
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6yva_A_1 identity=91.3%
queryA       746:EVRTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNG: 845
                :****************************************************************************************************:
6yva_A_1       1:EVRTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNG: 100
SecStr          :    EEEEEESSSSS EEEEE S   TTTTT S EETTEE TT    TT SS EEE    SHHHHHHHHHHH    TTHHHHHHHHHHHHTTS   EETT:    
ExpBur          :eeeeeebebbbbeeeeeeeebeeebebeeebbebbeebeebeeeebeeebeebebbbbbeeeebeebbeebbebeeeebbbebbebbeebeebebeebee:    

queryA       846:LTSIKWADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLK: 945
                :********** *************************************************************************           *****:
6yva_A_1     101:LTSIKWADNNSYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVXXXXXXXXXXXQTTLK: 200
SecStr          :EE     TTTHHHHHHHHHHTTS   BSSHHHHHHHHHHHTT  HHHHHHHHHHTT  TT    HHHHHHHHHHTB  TT EE -----------   EE:    
ExpBur          :bbbbeeeeebbbbbbbbbbbbbbebebebebbeebbeebeeeebbbbbbbbbbbbebebeeeeebeebbeebbeebebeebbbe-----------eeeee:    

queryA       946:GVEAVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPI:1045
                :******************               *******************************************************************:
6yva_A_1     201:GVEAVMYMGTLSYEQFKKXXXXXXXXXXXXXXXLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPI: 300
SecStr          :SGGGS  BS S STTTT ---------------   EESSEEEEEEEEEEEEE TTS SEEEEEEE SSSEEEEEEE SSS EEEETTEEE  SSEEEEE:    
ExpBur          :bbebbbeeeebeeebeee---------------eeebbbebbbbbbeeeeeebeeeebbbbbbbeeeeeeeebebbbbeebbbbbebeeeeeeeebebbb:    

queryA      1046:TDVFYKENS:1054
                :*********:
6yva_A_1     301:TDVFYKENS: 309
SecStr          :EEEEEE   :    
ExpBur          :bbbbbebee:    


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