#WARNING:no index is registered index "YP_009725299.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725299.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | D 1 (D) | polymer(polypeptide(L)) [313 aa] | Replicase polyprotein 1ab :R1AB_CVHSA | |
2 | b | E 1 (E) | polymer(polypeptide(L)) [76 aa] | ubiquitin :UBC_HUMAN | 851W 854N 855N 856C 857Y 907L 908G 909D 911R 912E 944L 948E 952Y 953M 968P 970T(V) 977K(Q) 993P 1009Y 1013Y 1014Q 1015C 1016G 1018Y 1046T (identity: 92.0 %/82.7 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5e6j_D_1 identity=82.7% |
queryA 748:RTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLT: 847 : ********** ***** *************************** ****** *** ***** ******** * ***************** *** ***: 5e6j_D_1 4:KTIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLT: 103 SecStr : EEEEEEESSSSS EEEEEETTS HHHHHSSEEETTEE SSS GGGTT EEEE SHHHHHHHHHHHS TTHHHHHHHHHHHHTTS EETTEE: ExpBur :eebebebbbbeeeeeeeebeeeebbeeebeebbbebeebbeeebeeebeeeebbbebeeeebeebbeebbeeeeeebbbebbebbeebeebebeebeebb: queryA 848:SIKWADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGV: 947 :*********** ** *** * *** **** ******** *********** ************** * ***** * ********* *** *** **: 5e6j_D_1 104:SIKWADNNCYLSSVLLALQQLEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRVLNVVCKHCGQKTTTLTGV: 203 SecStr : S SS HHHHHHHHHHTTS BSSHHHHHHHHHHHHT HHHHHHHHHHTT TT HHHHHHHHHTTB TT EEEEEEE SSS EEEEEEGG: ExpBur :bbeeeeebbbbbbbbbbbbbbebebebebbbebbeebeeeebbbbbbbbbbbbebeeeeeeebeebbeebbebbebeebebbbbeebeeeeeeeeeeeeb: Contact : b bbbb bbb bb b queryA 948:EAVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPITD:1047 :*********** * ** *** ** ** ******* ********* * * *** ** *********** *** ***** **** *** ****** **: 5e6j_D_1 204:EAVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQQESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPVTD: 303 SecStr :GGTEEES S HHHHHH EEEE SSSSEEEEEEEEEESSEEEEEEEEEEEEE TTS SEEEEEEEETTEEEEEEEEESSSEEEEETTEEEEES EEEEEEE: ExpBur :ebbbbeebbbbeebeeeeeeebeeeeebebbbeebebebbbbbbeeeeeebeeeebebbbbbeeeeeeeebbbbbeeeebbebebeeeeeeeebebebbb: Contact :b bb b b b b b bbbb b b queryA 1048:VFYKENSYTTTIK:1060 :***** *******: 5e6j_D_1 304:VFYKETSYTTTIK: 316 SecStr :EEEE SEEE : ExpBur :bbbebeeeebeee: |