[pdbjlvh2]Protein Model on 8gwb_F_1_B

#WARNING:no index is registered index "YP_009725308.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725308.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 8gwb_F_1_B_1

Protein Model on 8gwb_F_1_B_1 (TEMPLATE: 8gwb )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(queryA)	F 1 (E)	polymer(polypeptide(L)) [586 aa]	Helicase :R1AB_SARS2
2	b		B 1 (B)	polymer(polypeptide(L)) [187 aa]	Non-structural protein 8 :R1AB_SARS2	1A 2V 45V 48Y 67G 70Y 79I 80S 81F 90F 92L 93Y (identity: 100.0 %/98.8 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:8gwb_F_1 identity=98.8%

queryA         1:AVGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGS: 100
                :****************************************************************************************************:
8gwb_F_1       1:AVGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGS: 100
SecStr          :  EE SSS  EE EEETTSSS  EE HHHHHHHHHTSS   EESSS  S  STT     SSSEEEETTEEEETTT  SS EESEETTEES SSSSS    :    
ExpBur          :eeeebbbbebebbbebbebeeebebbbbbbeebbeebebeebbbeeebebebeebeeeebeebeebeebbebeeeeeeeeeebbeeeebebeebeeeebe:    
Contact         :bb                                          b  b                  b  b        bbb        b bb       

queryA       101:DNVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTF: 200
                :****************************************************************************************************:
8gwb_F_1     101:DNVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTF: 200
SecStr          :S  HHHHHHHHS S SHHHHHHHHSS HHHHHHHHHHHHHHHHHHHTTS  EEEEEEEETTEEEEE  SS     SSGGG B    BSSSSB     B E:    
ExpBur          :eeeeebbebbeeebeebebbeebbeeeeebbbbbbbbbbbbeeeebeebbebebeeeeeebebebeeeeeeeeeebebebebbbebeeeeeeeebeebeb:    

queryA       201:EKGDYGDAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYP: 300
                :***    *********************************************************************************************:
8gwb_F_1     201:EKGXXXXAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYP: 300
SecStr          :E  ----  EE  SS     TT EE           S S       SS  SS   SS   S TTTHHHHHHHTTSSEEEEE  TTSSTTTHHHHHHHH T:    
ExpBur          :bee----ebbebeeeeeebeeebebebeeeebeebebebbeeeeeeeeeeebeeeeeebeebeebeebbeebbebbbbbbbbbeebbbbebbbbbbebbe:    

queryA       301:SARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPARARVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIG: 400
                :************************************   *************************************************************:
8gwb_F_1     301:SARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPAXXXVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIG: 400
SecStr          :TS EEEE S STTHHHHHHHHHHHS STT EE    ---     SS S   S SEEE  GGG  SEEEEEEEEE  SS  HHHHHHHHHHEEEEEEEEES:    
ExpBur          :ebebbbbbeeeebbeebbeebeeebeeeebbbeeee---eeeeeeeeeebeeeebbbbbbeebeeeebbbbbbbbbbebbbbbbbbbbeebbbebbbbbb:    

queryA       401:DPAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFL: 500
                :****************************************************************************************************:
8gwb_F_1     401:DPAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFL: 500
SecStr          : SSS     TT  SS   GGGSSHHHHHHHSS  SEE     SS HHHHHHHHHHTSTT     S      B          SSS    HHHHHHHHHHH:    
ExpBur          :bbbbeebebebbeeeebeeeebbbbbebbeeeeeebebeebeebbbbbbebbbeeebeebbeeeeeeeeebebbeeeeeeeeeeeebebeebeebeeebe:    

queryA       501:TRNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSLEIP: 593
                :*********************************************************************************************:
8gwb_F_1     501:TRNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSLEIP: 593
SecStr          :TS GGGG EEEE SSTHHHHHHTTTS      GGG TT   SEEEE      TTTS TTTHHHHSSS SSEE     STTSTTTS  B     :    
ExpBur          :eeeeebeeeeebbbebbbeeeeeeeeeeebebeeeeeeeeeebbbbbbbeeeeeebbeebbbbbebbbebbbbbbbebeeeeeeeebeeeeee:

Protein Model on 8gwb_F_1_B_1 (TEMPLATE: 8gwb )

Input Residue Numbers for Focused Sites