#WARNING:no index is registered index "YP_009725308.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725308.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7rdx_E_1_H_1

Protein Model on 7rdx_E_1_H_1 (TEMPLATE: 7rdx )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) E 1 (E) polymer(polypeptide(L)) [590 aa] Helicase :R1AB_SARS2
2 b H 1 (T) polymer(polyribonucleotide) Template RNA 175P 176L 177N 178R 179N 180Y 233M 337R 361N 382Y (identity: 100.0 %/100.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7rdx_E_1 identity=100.0%
queryA         1:AVGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGS: 100
                :****************************************************************************************************:
7rdx_E_1       5:AVGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGS: 104
SecStr          :  EE TTT  EE EEESSSTT  EE HHHHHHHHHHSS   EESSSB    SSS     TTT EEETTEEE STT  SS EESSBTTB   SSTTS    :    
ExpBur          :eebebbbbebebbbebbebeeebbbbbebbeebbeebebeebebeeebebebeebeeeebeebeebeeebebeeeeeeeeeebbeeebbebeeeeebeee:    

queryA       101:DNVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTF: 200
                :****************************************************************************************************:
7rdx_E_1     105:DNVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTF: 204
SecStr          :TTHHHHHHHHH  S SSSHHHHTTSS HHHHHHHHHHHHHHHHHHTT    EE S  S SSSB   B TTS      TTEEEEE   SSS  S   EEB :    
ExpBur          :eebeebbebbebebeebebbeebbebeeebbbbbbbbbbbbbebebeebbebbbeeeeeeebbbbeeeeeeebbeeebebbbbbbbeeeeeeeeebbbbb:    
Contact         :                                                                          bbbbbb                    

queryA       201:EKGDYGDAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYP: 300
                :****************************************************************************************************:
7rdx_E_1     205:EKGDYGDAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYP: 304
SecStr          : B SSSS B  B SS     TT EEEEEEE      S SS    B SS  S    SS  STTGGGHHHHHHHHTBSEEEEE  TTSSHHHHHHHHHHHST:    
ExpBur          :eeeeeeeebebeeeeeeebeebbbbbbebbebeebebebbbeeeeeeeeeebeeeeebeeebeebeeebeebbebbbbbbbbbbbbbbbbbbbbbbebbe:    
Contact         :                                b                                                                   

queryA       301:SARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPARARVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIG: 400
                :****************************************************************************************************:
7rdx_E_1     305:SARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPARARVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIG: 404
SecStr          :TS EEEEESSSHHHHHHHHHHHHHS STT  B   SS  S   TTS BT TTSSEEEEEGGG  SEEEEEEEEE GGG  HHHHHHHHHHEEEEEEEEE :    
ExpBur          :ebbbbbbbbbbbbbebbbebbeeebeeeebbbbeeeeeeeebbeebeeeeeeeebbbbbbeebeebebbbbbbbbbbbbbbbbbbbbbeebebebbbbbb:    
Contact         :                                    b                       b                    b                  

queryA       401:DPAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFL: 500
                :****************************************************************************************************:
7rdx_E_1     405:DPAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFL: 504
SecStr          : TTS     TT  SS   GGGSSHHHHHHHHH  SEE  EE SS HHHHHHHHHHTSSS  EE S   S EEEEE     EE SSSEE HHHHHHHHHHH:    
ExpBur          :bbbbbbbebebeeeeebeeebbbbbbebbeeeeeebebebbebbbbbbbebbbebebeeebeeeeeeeeebbbbebebeeeeeeebbbbeebbeebeeeb:    

queryA       501:TRNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSL: 590
                :******************************************************************************************:
7rdx_E_1     505:TRNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSL: 594
SecStr          :SS GGGTT EEE SSHHHHHHHHHHH   B  TTTTSS  EEEEEEE   SSSSTT HHHHHHHHTTEEEEEEEEE  HHHHHH   B  :    
ExpBur          :eebeebeebbbbbbbebbbebbeeebebeeeebeebbbbebebbbbbbbbeeeebeeebebbbbbbbbeebbbbbbbbeebeeebebeee:    


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