#WARNING:no index is registered index "YP_009725308.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725308.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7nn0_D_1

Protein Model on 7nn0_D_1 (TEMPLATE: 7nn0 )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:4]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description
1 a A(queryA) D 1 (D) polymer(polypeptide(L)) [585 aa] SARS-CoV-2 helicase NSP13 :R1AB_SARS2
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7nn0_D_1 identity=98.8%
queryA         2:VGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGSD: 101
                :****************************************************************************************************:
7nn0_D_1       4:VGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGSD: 103
SecStr          : EE TTT  EES EESSSTT  B  HHHHHHHHTTSS   EESSSEES  STT     TTT EEETTEEE SSS  SS EESEETTEE  SSSSS    S:    
ExpBur          :ebebbbbebebbbebeebeeebebbbbbbeebbeebebeebbbeeebebebeeeebeebeebbbbeeebebeeeeeeeeeebbeeeebebeeeeebeeee:    

queryA       102:NVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTFE: 201
                :****************************************************************************************************:
7nn0_D_1     104:NVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTFE: 203
SecStr          :  HHHHHHHH  S BHHHHHHHHHS HHHHHHHHHHHHHHHHHHHHSS  EEEEEE SSSEEEEEE TTS     SSSS EEEEEE SSSEEEEEEEEEE:    
ExpBur          :ebeebbebbebebbebebbeebbebeeebbbbbbbbbebbebeeeeebbebebeeeeeebebebebeeeeeebeeeeebebbbebeeeeeeeebeebebe:    

queryA       202:KGDYGDAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYPS: 301
                :**    **********************************************************************************************:
7nn0_D_1     204:KGXXXXAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYPS: 303
SecStr          :E ---- EEEEESS     TT EEEE         S SS    B SS  S    S   SGGGGGHHHHHHHTTBSEEEEE  TTS HHHHHHHHHHHSTT:    
ExpBur          :ee----ebebeeeeeeebeeebbbebeeeebeebebebbbeeeeeeeeeebeeeeeeeeebeebeebbeebbebbbbbbbbbbbbebebbbbbbbebbee:    

queryA       302:ARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPARARVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIGD: 401
                :***********************************   **************************************************************:
7nn0_D_1     304:ARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPAXXXVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIGD: 403
SecStr          :S EEEEESSHHHHHHHHHHHHHHS GGGEEEE   ---     SSEES TTSSEEEEEGGG  SEEEEEEEEE  TT  HHHHHHHHHHEEEEEEEEEE :    
ExpBur          :bbbbbbbeeeebbbebbeebeebbeeeebbbbeee---eeebeebeeeeeeebbbbbbbebbeebebebbbbbbbbebebbbbbbbbeebebebbbbbbb:    

queryA       402:PAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFLT: 501
                :****************************************************************************************************:
7nn0_D_1     404:PAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFLT: 503
SecStr          :TTS     TT  BS   GGGS HHHHHHHHT  SEE  EE SS HHHHHHHHHHTSTT  EESS   S EEEEE     EE SS EE HHHHHHHHHHHH:    
ExpBur          :bbbbebebebeeeeebebebbbbbbebbeeeeeebebeebebbbbbbbebbbebbbeeebeeeeeeeeebbbbeeeeeeeeeeebbbbeebbebbeebbe:    

queryA       502:RNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSLEIP: 593
                :********************************************************************************************:
7nn0_D_1     504:RNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSLEIP: 595
SecStr          :H GGGTTSEEEES HHHHHHHHHHH   EEEHHHHTT  EEEEEEE    STTTT HHHHHHHHTTEEEEEEEEE  HHHHHH  SEE    :    
ExpBur          :eeeebeebbbbbbbebbbebbeeebebeeebbeebbeeebebbbbbbbbeeeebbeebbbbbbbbbbeebbbbbbbbeebbeebebeeeeee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123