[pdbjlvh2]Protein Model on 5rlt_A

#WARNING:no index is registered index "YP_009725308.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725308.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 5rlt_A_1

Protein Model on 5rlt_A_1 (TEMPLATE: 5rlt )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(queryA)	A 1 (A)	polymer(polypeptide(L)) [572 aa]	Helicase :R1AB_SARS2

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:5rlt_A_1 identity=96.6%

queryA         1:AVGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGS: 100
                :**********************************************************************************************      :
5rlt_A_1       1:AVGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKXXXXXX: 100
SecStr          :  B  TTT   BS EESSSTT  B  HHHHHHHHTTSS   EESSS SS  STT     GGGEEEETTEEEETTT  SS EESEETTEE  S  ------:    
ExpBur          :eebebbeeeeebbbebbebeeebebbbbbbeebbeebebeebbbeeebebebeebeeeebeebebbeeebebeeeeeeebeebbeeeebebeee------:    

queryA       101:DNVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTF: 200
                :  ***********************************************************************************        *******:
5rlt_A_1     101:XXVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYXXXXXXXXQIGEYTF: 200
SecStr          :-- HHHHHHHH  S BHHHHHHHHHS HHHHHHHHHHHHHHHHHTGGGS  EEEEEE SSSEEEEEE SSS     STTS EEE --------  EEEEE:    
ExpBur          :--eeebbebbebebbebebbebbbebeeebbbbbbbbbebbebeeeeebbebebeeeeeeeebebeeeeeeeebeebeebebbbe--------ebeebbb:    

queryA       201:EKGDYGDAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYP: 300
                :**    **********************************************************************************************:
5rlt_A_1     201:EKXXXXDAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYP: 300
SecStr          :E ----  EEEEESS     TT  EEE         S SS    B SS  S    SS  TTSGGGHHHHHHHHTBSEEEEE  TTSSHHHHHHHHHHHST:    
ExpBur          :ee----eebebbeeeeeebeeeeebebbeeebeebebebbbeeeeeeeeeebeeeeebeeebeebeeebeebbebebbbbbbbbebebebbbbbbbebbe:    

queryA       301:SARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPARARVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIG: 400
                :****************************************************************************************************:
5rlt_A_1     301:SARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPARARVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIG: 400
SecStr          :T  EEEEESSHHHHHHHHHHHHHHS GGGEEE   SS  S    SSEES TTSSEEEEEGGG  SEEEEEEEE  GGG  HHHHHHHHHHEEEEEEEEEE:    
ExpBur          :ebbbbbbbeebebbeebbeebeebbeeeebbbbbeeeeeeebbeebeeeeeeeebbbbbbebbeebebebbbbbbbbebebbbbbbbbeebebebbbbbb:    

queryA       401:DPAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFL: 500
                :****************************************************************************************************:
5rlt_A_1     401:DPAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFL: 500
SecStr          : TTS     TT  BS   GGGS HHHHHHHHT  SEE  EE SS HHHHHHHHHHHSTT  EESS   S EEEEE     EEETTEEE HHHHHHHHHHH:    
ExpBur          :bbbbbbbebebeeeeebebebbbbbbeebeeeeeebebeebebbbbbbbebbbebbbeeebeeeeeeeeebbbbeeeeeeeeeeeebbbeebbbbbeebb:    

queryA       501:TRNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSLEI: 592
                :********************************************************************************************:
5rlt_A_1     501:TRNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSLEI: 592
SecStr          :HH GGGGG EEEES HHHHHHHHHHT   EEEHHHHTT  EEEEEEE    SHHHH HHHHHHHHTTEEEEEEEEES HHHHHH  SEE   :    
ExpBur          :eeeeebeebbbbbbbbbbbebbeeebebeeebbeebbeeebebbbbbbbbeeeebbeebbbbbbbbbbeebbbbbbbbeebbeebebeeeee:

Protein Model on 5rlt_A_1 (TEMPLATE: 5rlt )

Input Residue Numbers for Focused Sites