[pdbjlvh2]Protein Model on 7lmc_C_1_A

#WARNING:no index is registered index "YP_009725295.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725295.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7lmc_C_1_A_1

Protein Model on 7lmc_C_1_A_1 (TEMPLATE: 7lmc )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(queryA)	C 1 (B)	polymer(polypeptide(L)) [306 aa]	3C-like proteinase :R1AB_SARS2
2	b		A 1 (E)	polymer(polypeptide(L)) [6 aa]	Non-structural protein 4 peptide :R1AB_SARS2	3304H 3312M 3403F 3404L 3405N 3406G 3407S 3408C(A) 3426H 3427H 3428M 3429E 3431P 3435H 3450D 3451R 3452Q 3453T 3454A 3455Q (identity: 95.0 %/99.7 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7lmc_C_1 identity=99.7%

queryA      3264:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK:3363
                :****************************************************************************************************:
7lmc_C_1       1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100
SecStr          :          HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGS  TTTTTS  HHHHHHH  GGG EEEETTEEE B    EETTEEEEEBSS  TT  E:    
ExpBur          :eebeeeebebeebeebbbbbbeeebebbbbbbeebbbbbbbbbbeeeebeeeebeebbeeeeeeebebeeeeeebebeeeeeeebbbebebeeebeeebe:    
Contact         :                                        b       b                                                   

queryA      3364:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI:3463
                :******************************************** *******************************************************:
7lmc_C_1     101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSAGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200
SecStr          :EEE    TT EEEEEEEETTEEEEEEEEE  TTS B     TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BSSS  SSSS        B :    
ExpBur          :eeeeebeebebbbbbbbbebeeeeeebbbbbbbebbeeebeeebbbbbbbbbeeebbbbbbbbbbebeeebbbbbbbebebbeebebeeeebebeebebb:    
Contact         :                                       bbbbbb                 bbbb b   b              bbbbbb        

queryA      3464:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC:3563
                :****************************************************************************************************:
7lmc_C_1     201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300
SecStr          :HHHHHHHHHHHHHTT  TT  S    HHHHHHHHHHTSB    HHHHHHTHHHHHHHS  HHHHHHHHHHHHHH  TT  BTTBSS      HHHHHHHT:    
ExpBur          :bbbbbbbbbbbbebeeeebbeeeebeeeebbebbeeeebeebeeeebeebeebbeeeebebeebbbbbbebbeeebeeeebeebeeeebbbbbebbeebe:    

queryA      3564:SGVTFQ:3569
                :******:
7lmc_C_1     301:SGVTFQ: 306
SecStr          :TT    :    
ExpBur          :eeeeee:

Protein Model on 7lmc_C_1_A_1 (TEMPLATE: 7lmc )

Input Residue Numbers for Focused Sites