[pdbjlvh2]Protein Model on 8v1f_B_1_A

Protein Model on 8v1f_B_1_A_1 (TEMPLATE: 8v1f )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TMPS2_HUMAN)	B 1 (B)	polymer(polypeptide(L)) [241 aa]	Transmembrane protease serine 2 :TMPS2_HUMAN
2	b		A 1 (A)	polymer(polypeptide(L)) [105 aa]	Transmembrane protease serine 2 non-catalytic chain :TMPS2_HUMAN	264P 265G 266A 268P 269W 286I 359D 362K 363P 364V 365C 366L 368N 369P 370G 450N 452I 453W 454W 485Y 488M 489R (identity: 100.0 %/100.0 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:8v1f_B_1 identity=100.0%

queryA       256:IVGGESALPGAWPWQVSLHVQNVHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFYGAGYQVEKVISHPNYDSKTKNNDIALMKLQKPL: 355
                :****************************************************************************************************:
8v1f_B_1       1:IVGGESALPGAWPWQVSLHVQNVHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFYGAGYQVEKVISHPNYDSKTKNNDIALMKLQKPL: 100
SecStr          : BS EE  TTSSTTEEEEEETTEEEEEEEE SSSEEEE GGGG TTS SGGGEEEEES  BGGG  TTSSEEEEEEEE TT BTTTTBT  EEEEESS  :    
ExpBur          :bbeeeebeeeebbbbbbbbbeeebebbbbbbeeebbbbbbebbeeeeeeeebbbbbbeeeebeebeeeeeeebeebbebeebeeeeeebbbbbbbbeeeb:    
Contact         :        bbb bb                b                                                                     

queryA       356:TFNDLVKPVCLPNPGMMLQPEQLCWISGWGATEEKGKTSEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDSCQGDSGGPLVTSKNNIWWL: 455
                :****************************************************************************************************:
8v1f_B_1     101:TFNDLVKPVCLPNPGMMLQPEQLCWISGWGATEEKGKTSEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDSCQGDSGGPLVTSKNNIWWL: 200
SecStr          :   SS    B   TT    TT EEEEEESS SSTT    SB EEEEEEEE HHHHTSTTTTTT   TTEEEEE TT SSB  TTTTT EEEEEETTEEEE:    
ExpBur          :eeeeebeebebbeeebeeeeebebebbbbbbeeeebeebeebbbbebebbeeeebbeeebbeeebeebbbbbbeeebeebbbebbbbbbbbbeeeeeebb:    
Contact         :   b  bbbbb bbb                                                                               b bbb 

queryA       456:IGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMRADG: 492
                :*************************************:
8v1f_B_1     201:IGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMRADG: 237
SecStr          :EEEEEE SSSS TT  EEEEEGGGGHHHHHHHHHHTT:    
ExpBur          :bbbbbeeeebbeeeebbbbbbbeebbebbeeeeeebe:    
Contact         :                             b  bb

Protein Model on 8v1f_B_1_A_1 (TEMPLATE: 8v1f )

Input Residue Numbers for Focused Sites