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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TMPS2_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [238 aa] | Transmembrane protease serine 13 :TMPSD_HUMAN | |
2 | b | E 1 (E) | branched(oligosaccharide) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 334H(N) 335P(S) 336N 344N(Y) 483W (identity: 40.0 %/47.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:6kd5_B_1 identity=47.0% |
queryA 256:IVGGESALPGAWPWQVSLHVQNVHVCGGSIITPEWIVTAAHCV----EKPLNNPWHWTAFAGILRQSFMFYGAGYQVEKVISHPNYDSKTKNNDIALMKL: 351 :**** * ******** * *** * * ***** ** * * ** * * ** ***** *: 6kd5_B_1 1:IVGGALASDSKWPWQVSLHFGTTHICGGTLIDAQWVLTAAHCFFVTREKVLEG---WKVYAGTSNLHQLPEAA--SIAEIIINSNYTDEEDDYDIALMRL: 95 SecStr : BS EE TTSSTTEEEEEETTEEEEEEEEEETTEEEE SGGGGSSSS STT---EEEEES SBTTS B-- EEEEEE TT TTS TT EEEEE: ExpBur :bbeeeebeeeebbbbbbbbeeeebbbbbbbbebebbbbbbebbeeeeeeeeeb---bebbbebbebeeeeeeb--ebebebebeebeeeeeeebbbbbeb: Contact : bbb b queryA 352:QKPLTFNDLVKPVCLPNPGMMLQPEQLCWISGWGATEE-KGKTSEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDSCQGDSGGPLVTSKN: 450 : **** * *** * *** * * * * *** * * ** ** *** ** * *** * * ************ *: 6kd5_B_1 96:SKPLTLSAHIHPACLPMHGQTFSLNETCWITGFGKTRETDDKTSPFLREVQVNLIDFKKCNDYLVYDSYLTPRMMCAGDLRGGRDSCQGDSGGPLVCEQN: 195 SecStr :SS SSS B TT TT EEEEEESS SSTT SS SB EEEEEEEE HHHHTSTTTTTT TTEEEEE TTSS B TT TT EEEEEET: ExpBur :eeebeeeeebeebebbeeebebeeebebbbbbbbbbeeeeeeebeebebbebbbbeeeebbeeebbeeebbebbbbbbebeeeebbbebbbbbbbbbeee: queryA 451:NIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMRA: 490 :* * * * **** ** **** * *** * : 6kd5_B_1 196:NRWYLAGVTSWGTGCGQRNKPGVYTKVTEVLPWIYSKMEV: 235 SecStr :TEEEEEEEEEE SSSS TT EEEEEGGGSHHHHHHHHHH: ExpBur :eeebbbbbbbbeeebeeeeebbbbbebeebbebbeeebee: Contact : b |