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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TMPS2_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [223 aa] | TRYPSIN :TRY2_RAT | |
2 | b | A 1 (A) | polymer(polypeptide(L)) [223 aa] | TRYPSIN :TRY2_RAT | 406E(P) 408Q(A) 409R(D) 412S(A) 417D(P) 430L (identity: 16.7 %/41.4 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:1trm_B_1 identity=41.4% |
queryA 256:IVGGESALPGAWPWQVSLHVQNVHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFYGAGYQVEKVISHPNYDSKTKNNDIALMKLQKPL: 355 :**** * **** * **** * * * **** * * * * * *** * ** ** * * ** * : 1trm_B_1 1:IVGGYTCQENSVPYQVSLN-SGYHFCGGSLINDQWVVSAAHCYKSRIQVRLGEHNI-NVLEGNEQFVNAA----KIIKHPNFDRKTLNNNIMLIKLSSPV: 94 SecStr : BS EE TT STTEEEEE-SSSEEEEEEEEETTEEEE GGG SS EEEES SBT-TS S EEEEEE----EEEE TT TTT TT EEEEESS : ExpBur :bbeeeebeebebebbbbbb-eeebbbbbbbbeeebbbbbbebeeeebebebbbbbb-eeeeeebeebebe----eeeebeebeeeebebbbbbbbbeeeb: queryA 356:TFNDLVKPVCLPNPGMMLQPEQLCWISGWGATEEKGKTS-EVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDSCQGDSGGPLVTSKNNIWW: 454 : * * * ** * ***** * * * * * * ** * * *** * ********** * : 1trm_B_1 95:KLNARVATVALPSSCAPAGTQ--CLISGWGNTLSSGVNEPDLLQCLDAPLLPQADCEASY--PGKITDNMVCVGFLEGGKDSCQGDSGGPVVCNGE----: 186 SecStr : SSSS B SS TT E--EEEEESS SSS SB EEEEEEB HHHHHHHS--TTT TTEEEES TT S B TT TT EEEETTE----: ExpBur :eeeeebeebeebeeebeeebe--bebbbbbbbeeeeeeebeebbbbebbbbeeeebeebb--eeebeebbbbbbbeebeebbbeebbbbbbbbeeb----: Contact : b bb b b b queryA 455:LIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMRAD: 491 :* * *** *** **** * *** * : 1trm_B_1 187:LQGIVSWGYGCALPDNPGVYTKVCNYVDWIQDTIAAN: 223 SecStr :EEEEEEE SSSS TT EEEEEGGGTHHHHHHHHHH : ExpBur :bbbbbbeeeebbeeebbbbbbebbebeebbeebeeee: |