[pdbjlvh2]Protein Model on 8oz0_DB_1_EB

Protein Model on 8oz0_DB_1_EB_1 (TEMPLATE: 8oz0 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(DDX1_HUMAN)	DB 1 (1)	polymer(polypeptide(L)) [371 aa]	Eukaryotic initiation factor 4A-I :IF4A1_HUMAN
2	b		EB 1 (2)	polymer(polypeptide(L)) [237 aa]	Eukaryotic translation initiation factor 4 gamma 1 :IF4G1_HUMAN	497A(E) 541S(T) 565D(S) (identity: 0.0 %/33.9 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:8oz0_DB_1 identity=33.9%

queryA       249:FPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE-NGVDIVVGTP: 347
                : *   *      *  *   *          *      *  **   * **** *          *           ***   *     *      * ****:
8oz0_DB_1     64:LPCIKGYDVIAQAQSG-TGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHA---CIGGTNVRAEVQKLQMEAPHIIVGTP: 159
SecStr          :HHHHTTS B    S S-TTHHHHHHHHHHHHS  SSS      B SSHHHHHHHHHHHHHH SSS      ---  TTS  HHHHHHHHH   S   B S:    
ExpBur          :eebbeeebbebbbeee-eebeebebebeeeebeeeeeebbeebebeebeebeeebebeeebeeebeeeeee---beeeeeeeeeeeebeeeebbbebbee:    

queryA       348:GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP: 447
                :**  *      *        ******  ** *  * *          *      **   ***  * **     * *  *     * *             :
8oz0_DB_1    160:GRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNT------QVVLLSATMPS-DVLEVTKKFMRDPIRILVKKEELTLEGIRQFYIN: 252
SecStr          :HHHHHHHHTTSS  SS  B  BSSHHHH STHHHHHHHHHHHSS S  ------B     SS  H-HHHHHTTSSSS  B     THHHHS SSEEE   :    
ExpBur          :ebeeebeeeebeeeeebbbbeeebbeebeeeeebeeeeeeeeeeeeee------eebeebbeeee-ebeeeeeeeeeeeeebeeeeeeeeeeeeeebbee:    

queryA       448:VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHG: 547
                :*        **                        * *      *   *    *      ** **  *    * *                 *     **:
8oz0_DB_1    253:V--------ER------------------------EEWK--LDTLCDLYETLTIT-----QAVIFINTRRKVDWLTEKM---------HARDFTVSAMHG: 304
SecStr          : -------- S------------------------HHHH--HHHHHHHHHHTT  -----      SSHHHHHHHHHHH---------HHTT  S    T:    
ExpBur          :b--------eb------------------------eebb--eeeeeeebeeeeee-----bebebbeeeeebeeeeeeb---------eeeeeeebeeee:    
Contact         :                                                 b                                           b      

queryA       548:DRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE: 645
                :*    **      *  *  * ** **  *****   *  ***  **    ** ***** **  * * **  *  *                ***   *:
8oz0_DB_1    305:DMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDI-----ETFYNTSIEE: 397
SecStr          :TS HHHHHHHHHHHTTSTT S    STTSSS   SS       S  S HHHHHHHHTTTTTTS   EEE    THHHHHHHHH-----HHHTT     :    
ExpBur          :eeeeeebeebeebbeeeebbebbebbebeeeeeeebbbbbeeeeeeeebeebeebeeebbbeebebebeebeeeeebeeeeee-----beeeeeeeee:    
Contact         :                 b

Protein Model on 8oz0_DB_1_EB_1 (TEMPLATE: 8oz0 )

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