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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(DDX1_HUMAN) | Y 1 (CW) | polymer(polypeptide(L)) [537 aa] | ATP-dependent RNA helicase :G0RYG4_CHATD | |
2 | b | KB 1 (CW) | non-polymer(ADP) | ADENOSINE-5'-DIPHOSPHATE | 22W(Y) 24L(Q) 25P 26T 29Q 48T 49G 50S 51G 52K 53T 54G(L) 580D 608R (identity: 78.6 %/36.9 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:8i9z_Y_1 identity=36.9% |
queryA 13:IAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQ: 112 :* * * ** * * ** * ****** ** *** : 8i9z_Y_1 26:ILDYVSSMGYEQPTPVQKSCLDIFRGNKDVVVEAVTGSGKTLAFLIPVVE--------------------------------------------------: 75 SecStr :HHHHHHHH S HHHHHHHHHHHTT EEEEE TTS HHHHHHHHHHH--------------------------------------------------: ExpBur :bbebbeeeeeeebeebbeebbeebbeeebbbbbbebebebebbbbbbbbb--------------------------------------------------: Contact : b bbb b bbbbbbb queryA 113:SREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDL: 212 : : 8i9z_Y_1 -1:----------------------------------------------------------------------------------------------------: -1 SecStr :----------------------------------------------------------------------------------------------------: ExpBur :----------------------------------------------------------------------------------------------------: queryA 213:GLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP--------------KALIVEPSREL: 298 : * * * ***: 8i9z_Y_1 76:---------------------------------------------------------------------------RLLRLDEAAKKHHVQAIIISPTREL: 100 SecStr :---------------------------------------------------------------------------HHHHSSS SSB EEEE SSHHH: ExpBur :---------------------------------------------------------------------------bbeeeeeebeebbbbbbbbbbbebb: queryA 299:AEQTLNNIKQFKKY-------------------IDNPKLRELLIIGG-VAARDQLSV-LENGVDIVVGTPGRLDDLVSTG--KLNLSQVRFLVLDEADGL: 375 :* * * * * * ** * * ** * ******* * * * * ** **** *: 8i9z_Y_1 101:ASQIYNVLVSLIKFHPESSELLQYAKSDEKRPATTKPVIVPQLLVGGTVKAAEDLSIFLRLSPNLLVGTPGRLAELLSSPYVKTPASSFEVLVMDEADRL: 200 SecStr :HHHHHHHHHHHHHTSTTHHHHHHHHSSSS SS EEEE SSS HHHHHHHHHHH SEEEE HHHHHHHHHSTT B TTS EEEEESHHHH: ExpBur :bebbeebbeebbeebeebeebeeebeeeeebeeeeeebbbbbbbebeeeeeeebeeebeebbbbbbbbbbebbbebbeeeebebeeebbebbbbbbbbeb: queryA 376:LSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK----------GEDSVPDTVH--HVVVPVNPKTDRLWERLGKSH: 463 :* * * * * * ** * * * * * * * * * * * * * * : 8i9z_Y_1 201:LDLGFSPELTRILGYLPKQRRTG------LFSASL-SDAVERLITVGMLYPHKITVRVXXXXXXXXXEERKTPMSLQMSYIVTPASHKIPALCQILEKL-: 292 SecStr :TSGGGHHHHHHHHHHS SSSEEE------EEES -TTSGGGGGGT SSEEEEE --------- S TTEEEEEEE GGGHHHHHHHHHHT -: ExpBur :bbeebeeebeebbeebbeebebb------bbbbbb-eebeeebeebebeeeeeeeeee---------eeebbbeebebbebebebbbbbbbbbbbbeeb-: queryA 464:IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKK: 563 : ** * * * * ** * * * * *** ** * * *** : 8i9z_Y_1 293:----------DPRP-----------------------------QRSIVFFST---CFAV-KYFARVLHGILPAG--YSIVSLHGKLEPHVREKNYERFVT: 347 SecStr :----------SS -----------------------------SEEEEE S ---HHHH-HHHHHHSSSSS SS-- EEEE TTS HHHHHHHHHHHHT: ExpBur :----------eeeb-----------------------------ebbbbbbeb---bebb-ebbbebbeeebbee--bebbbbbeeeeeeebeebbeebee: queryA 564:G-DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSR: 634 : * ** **** ** * ** * ** ** *** * ** * *: 8i9z_Y_1 348:ATSPTVLLTTDIAARGLDIPQVDLVIQHDPPTDTKVFIHRCGRAGRAGRRGLSVVMLQPGREEGYVQLLEVR: 419 SecStr : S EEEEE GGGSSS SS EEEESS SSHHHHHHHHTTS SSSS EEEEEEE SSGGGTHHHHHHHH: ExpBur :beeebbbbbbebbbbebebeebbbbbbbbbbeebbbbbbbbbbbbbeeeebbbbbbbbeeebeebbeebeee: Contact : b b |