[pdbjlvh2]Protein Model on 8i9v_AA_1_V

Protein Model on 8i9v_AA_1_V_1 (TEMPLATE: 8i9v )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(DDX1_HUMAN)	AA 1 (Cb)	polymer(polypeptide(L)) [642 aa]	ATP-dependent RNA helicase DBP10 :G0S5S8_CHATD
2	b		V 1 (CT)	polymer(polypeptide(L)) [458 aa]	Nucleolar complex-associated protein 3 :G0S5L0_CHATD	393Q(P) 394V(S) 424H(Q) (identity: 0.0 %/33.0 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:8i9v_AA_1 identity=33.0%

queryA         4:FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA: 103
                :*  **       *        ** **   *****   **   * ****** ** ** *                                          :
8i9v_AA_1     92:FQAMGLDANLLRAIARKGFSVPTPIQRKTIPLILERRDVVGMARTGSGKTAAFVIPMIE-----------------------------------------: 150
SecStr          :HHHH   HHHHHHHHHHT  S  HHHHHHHHHHHTT EEEEE  TTS HHHHHHHHHHH-----------------------------------------:    
ExpBur          :beeeebeeebeebbeeeeeeebeebbeebbeebeeeebbbbbbbeebbbebbbbbbbbe-----------------------------------------:    

queryA       104:IGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHV: 203
                :                                                                                                    :
8i9v_AA_1     -1:----------------------------------------------------------------------------------------------------:  -1
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

queryA       204:KFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP-----------KALIV: 292
                :                                                                                                **  :
8i9v_AA_1    151:------------------------------------------------------------------------------------RLKAHSARFGARALVL: 166
SecStr          :------------------------------------------------------------------------------------HH S  SBSS  EEEE:    
ExpBur          :------------------------------------------------------------------------------------ebeeebeebbbebbbb:    

queryA       293:EPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIP: 392
                : ****** ***   *   *  *   *   *  **     *        **   ****   *     * **     * **** *   *            *:
8i9v_AA_1    167:SPSRELALQTLKVVKELGKGTD---LKTVLLVGGDSLEEQFGLMATNPDIIIATPGRFLHLKVEMSLDLSSIKYVVFDEADRLFEMGFAAQLTEILHALP: 263
SecStr          : SSHHHHHHHHHHHHHH  SS ---  EEEE TTS TTHHHHHHHT  SEEEE HHHHHHHHHHHT  GGG  EEEEETHHHHHHTT HHHHHHHHHHS :    
ExpBur          :bbeeeebeebeebbeebeeeee---eeebebbeeeebeebbbbbebbbbbbbbbbebbbebebbbeeebeebebbbbbbbbbbbeeebeebbeebbeebb:    

queryA       393:QVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGK-SHIRTDDVHAKDNTRPGANSPEMWSEAIKI: 491
                :         *    **** *             *  * *  *  *          *        *  *   **  *         *              :
8i9v_AA_1    264:PSR------QTLLFSATLPS-SLVEFTRAGLQDPVLVRLDAETKVSPDLESAFFSV-----KSGEKEGALLHILYDIIKMPLGDPPXXXXXXXXXXXXXX: 351
SecStr          :SS ------EEEEEES   H-HHHHHHHHHSSSEEEE  SSSSS  TTEEEEEEE ----- GGGHHHHHHHHHHTTS   SB   --------------:    
ExpBur          :eeb------bbbbbbbbbbe-ebbebbeebbeebbebebeeeeebeeebebbbbbb-----eeeebbbbbbbbbeebbebeeeeee--------------:    
Contact         :bb                             b                                                                    

queryA       492:LKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVT: 591
                :                  ***  **             *         **     *      **     *  *    *  **********     ***  :
8i9v_AA_1    352:XXXXXXXXXXXKPTEHSTIIFTATKHHVEYISNLLRLAG---------FSVSYVYGSLDQTARKIQVDNFRRGRTNILVVTDVAARGIDIPVLANVINYD: 442
SecStr          :-----------   SS EEEE SSHHHHHHHHHHHHHHT---------B EEE  TT  HHHHHHHHHHHHTTS SEEEE SHHHHHS    BSEEEESS:    
ExpBur          :-----------eeeeebbbbbbbbbbbbebbbebbeebe---------bbbbebbeebeeeeeeebbeebeebebbbbbbbbbbbbebebeebbbbbbbb:    

queryA       592:LPDEKQNYVHRIGRVGRAERMGLAISLV: 619
                : *      *** **  **   * *  **:
8i9v_AA_1    443:FPPQPKIFVHRVGRTARAGQRGWAYALV: 470
SecStr          :  SSHHHHHHHHTTBS TT  EEEEEEE:    
ExpBur          :bbbbebbbbbbbebbbbeeeebebbbbb:

Protein Model on 8i9v_AA_1_V_1 (TEMPLATE: 8i9v )

Input Residue Numbers for Focused Sites