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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(DDX1_HUMAN) | G 1 (CE) | polymer(polypeptide(L)) [463 aa] | RNA helicase :G0RYU9_CHATD | |
2 | b | F 1 (CC) | polymer(polypeptide(L)) [289 aa] | Ribosome biogenesis protein ERB1 :ERB1_CHATD | 596K(P) 597Q(R) 600V(I) (identity: 0.0 %/33.9 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:8i9t_G_1 identity=33.9% |
queryA 4:FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA: 103 :*** * ** * ** ** * * *** ** ****** ** ** : 8i9t_G_1 113:FSELNLSEKTTKAIAEMGFTKMTEIQRRAIPPALAGKDVLGAAKTGSGKTLAFLIPAVEML---------------------------------------: 173 SecStr :TTTS HHHHHHHHHHT B HHHHHTHHHHHHT EEE TTSSHHHHHHHHHHHHH---------------------------------------: ExpBur :beebebbeebeebbeebeeeebeebbeebbeebeeeebbbbbbebeeebbbbbbbbbbebb---------------------------------------: queryA 104:IGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHV: 203 : : 8i9t_G_1 -1:----------------------------------------------------------------------------------------------------: -1 SecStr :----------------------------------------------------------------------------------------------------: ExpBur :----------------------------------------------------------------------------------------------------: queryA 204:KFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLP-NAPKALIVEPSRELAEQT: 302 : * * * * * * **** * : 8i9t_G_1 173:-------------------------------------------------------------------------LSSLRFKPRNGTGAIVVTPTRELALQI: 199 SecStr :-------------------------------------------------------------------------HHHHT GGG SEEEE SSHHHHHHH: ExpBur :-------------------------------------------------------------------------bbeeebeeeebbbbbbbbbbbbbbeeb: queryA 303:LNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ: 402 : ** *** * * ** ***** * * **** * * * * : 8i9t_G_1 200:FGVARELMKYHSQT---YGVVIGGANRRAEAEKLGKGVNLLIATPGRLLDHLQNTPFVFKNLKSLIIDEADRILEIGFEDEMRQIVKILP----------: 286 SecStr :HHHHHHHTTSSSS ---EEEE SSS HHHHHHHHHH SEEEE HHHHHHHHHHS TT EEEEETHHHHHHHT HHHHHHHHHHS ----------: ExpBur :ebbbebbbeebebe---ebbbbebeeeeebeeebeebbbbbbbbbebbbebbeebebeeeebebbbbbbbbbbbeeeeeeebeebbeebe----------: queryA 403:VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIK: 502 : * * * * ** * * * * * * * * ** * *: 8i9t_G_1 287:--------------KEDRQTMLFSATQTTKVEDLA----------------RISLRPGPLYINVDE-EKKYSTVEGLEQGYVVVEADKRFLLLFSF--LK: 353 SecStr :-------------- SS EEEEE SS HHHHHHH----------------HHHS S EEE - SSS EEEEE GGGHHHHHHHH--HH: ExpBur :--------------eeebbbbbbbeeeeeebeebb----------------eebbeeeeeebeebe-eeeeeeeeebebbbbebebbebbbbbbbb--be: queryA 503:EHKMDQAIIFCRTKIDCDNLEQY--FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV: 600 : * * * * * * *** * * * ********** ** * ** * : 8i9t_G_1 354:KMAKKKIIVFFSS---CNSVKYYSELLQYIDLP--------VLDLHGKQKQQKRTNTFFEFCNAKSGTLICTDVAARGLDIPQVDWIVQFDPPDDPRDYI: 442 SecStr :HTTTSEEEEEES ---HHHHHHHHHHHHHTT -------- EEE TTS HHHHHHHHHHHHT SSEEEEEEHHHHHHS S SEEEE S S HHHHH: ExpBur :eeeeebbbbbbbb---bebbebbbbbbeebebe--------bebbbeebeeeebeebeeebeeeeeebbbbbbbbbeeeebeebebbbbbbbbebbeebb: Contact : bb b queryA 601:HRIGRVGR: 608 :** ** *: 8i9t_G_1 443:HRVGRTAR: 450 SecStr :HHHHHHHH: ExpBur :ebbbeebe: |