[pdbjlvh2]Protein Model on 8eti_J_1_A

Protein Model on 8eti_J_1_A_1 (TEMPLATE: 8eti )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(DDX1_HUMAN)	J 1 (D)	polymer(polypeptide(L)) [391 aa]	ATP-dependent RNA helicase has1 :HAS1_SCHPO
2	b		A 1 (1)	polymer(polyribonucleotide)	RNA (1564-MER)	327V(A) 328A(N) 330R 331D(A) 335V(K) (identity: 20.0 %/41.9 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:8eti_J_1 identity=41.9%

queryA        13:IAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQ: 112
                :*  *  **     * **  ***  * * *** ** ****** ** ** *   *                                               :
8eti_J_1     100:IQKAIKEMGFETMTEIQKRSIPPLLAGRDVLGAAKTGSGKTLAFLIPTIEMLY-----------------------------------------------: 152
SecStr          :HHHHHHHHT  S  HHHHTTHHHHHTT        TTSSHHHHHHHHHHHHHH-----------------------------------------------:    
ExpBur          :eeebeeebeeeeeeeebeeeeeeeeeeeeeeeeeeeeeeeeeeeeebeeeebe-----------------------------------------------:    

queryA       113:SREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDL: 212
                :                                                                                                    :
8eti_J_1      -1:----------------------------------------------------------------------------------------------------:  -1
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

queryA       213:GLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQT--KFLP-NAPKALIVEPSRELAEQTLNNIKQF: 309
                :                                                                      ** * *     *  * **** *     *  :
8eti_J_1     153:--------------------------------------------------------------------ALKFKPRNGTGVIIISPTRELALQIFGVAKEL: 184
SecStr          :--------------------------------------------------------------------HHT  TTS   EEEE S HHHHHHHHHHHHHH:    
ExpBur          :--------------------------------------------------------------------eeeeeeeeebebeeebeeeeebeeebeeeeee:    

queryA       310:KKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSA: 408
                : **           ***   *     *  **   * **** ** *  *        * ** ****  *  *  *         *                :
8eti_J_1     185:LKYHHQT---FGIVIGGANRRAEADKLVKGVNLLVATPGRLLDHLQNTKGFVFRNLRSLVIDEADRILEIGFEDEMRQIMKILP----------------: 265
SecStr          :GGGS S ---EEEE SSS TTTTHHHHTT  SEEEE TTTTHHHHTT SS   TT SEEEE  HHHHGGGT TTHHHHHTTTS ----------------:    
ExpBur          :eeeeeee---eeebeeeeeeeeeeeeeeebbbebbbbeebeeeeeeeeeebeeeeeeeebeeeeeebeeeeeeebeeeeeeeee----------------:    
Contact         :                 bb bb   b                                                                          

queryA       409:TLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ: 508
                :                                                                                                    :
8eti_J_1      -1:----------------------------------------------------------------------------------------------------:  -1
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

queryA       509:AIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVC----------------------------------------------------------------: 544
                :                                                                                                    :
8eti_J_1     266:------------------------------------SENRQTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQGYVVVDSDKRFLLLFS: 329
SecStr          :------------------------------------ TT EE ---------------------------------------  EEEE  SSSHHHHHHH:    
ExpBur          :------------------------------------eeebeee---------------------------------------eeebeebeeeebebeeee:    

queryA       545:-------------------------------------LHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIG: 604
                :                                     ***  *   *      *       * ** ***** **  *        **    * ** *:
8eti_J_1     330:FLKRNLKKKVIVFMSSCASVKYMAELLNYIDLPVLD-LHGKQKQQRRTNTFFEFCNAEKGILLCTNVAARGLDIPAVDWIVQYDPPDDPRDYIHRVG: 425
SecStr          :HHHHTTTSEEEEEESSHHHHHHHHHHHHHTT   EE-SSTTT HHHHHHHHHHHHH SSEEEEEEHHHHTTS     SEEEESS  S HHHHHHHH :    
ExpBur          :eeeeeeebbbeebbebeebbebeeeebeeeeeeeee-ebeeeeeeebeebeeeeeeeeeeebbbbeeeebeeeeeebebeebeeeeeeeeeeeeeee:

Protein Model on 8eti_J_1_A_1 (TEMPLATE: 8eti )

Input Residue Numbers for Focused Sites