Protein Model on 8enk_B_1_E_1 (TEMPLATE: 8enk )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(DDX1_HUMAN) B 1 (B) polymer(polypeptide(L)) [381 aa] Spliceosome RNA helicase DDX39B :DX39B_HUMAN
2 b E 1 (N) polymer(polyribonucleotide) RNA 294P(H) 295S(T) 296R 324I(F) 325G 326G 346T 347P 348G 349R 352D(A) 378Q 380Y(D) 384I(M) 515T(S) 516K(V) 546H 547G(R) 554R 572T 573D(N) 574V(L) (identity: 50.0 %/33.6 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:8enk_B_1 identity=33.6%
queryA         2:AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSA: 101
                :  *      **   *        *   * * **    * ***  *  * ***  *     *                                       :
8enk_B_1       7:SGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQ---------------------------------------:  67
SecStr          : SGGGG   HHHHHHHHHTT  S  HHHHHHHHHHTTT  EEEE  TTSSHHHHHHHHHHH---------------------------------------:    
ExpBur          :ebbeebebeeebbebbeebeeeebbebbeebbeebeeeebbbbbbebbbebebbbbbbbbb---------------------------------------:    

queryA       102:FAIGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKG: 201
                :                                                                                                    :
8enk_B_1      -1:----------------------------------------------------------------------------------------------------:  -1
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

queryA       202:HVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPK----------ALI: 291
                :                                                                                                  * :
8enk_B_1      68:---------------------------------------------------------------------------------------QLEPVTGQVSVLV:  80
SecStr          :---------------------------------------------------------------------------------------H    TT   EEE:    
ExpBur          :---------------------------------------------------------------------------------------ebeeeeeebbbbb:    

queryA       292:VEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE-NGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQ: 390
                :    **** *       * **  * *       **        **  *   ********   *     ***       *** *  * *       *    :
8enk_B_1      81:MCHTRELAFQISKEYERFSKYMPNVKVA--VFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLD---MRRDVQE: 175
SecStr          :E SSHHHHHHHHHHHHHHTTT TT  EE--EE TTS HHHHHHHHHHS  SEEEE HHHHHHHHHHTSS  TT  EEEEESHHHHHH HH---HHHHHHH:    
ExpBur          :bbbbbbbbbbbbebbeebbeebeebeeb--ebbbeeeeeebbeebeeeebbbbbbbbebbbebbeeeebebeebebbbbbbbbebbeeee---bbebbee:    
Contact         :  bbb                           bbb                    bbbb  b                         b b   b      

queryA       391:IPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-----HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMW: 485
                :*   *   *  **   **** *        * *  *       *     * *      *    * *   *   *        **                :
8enk_B_1     176:IFRMTPHEK--QVMMFSATL-SKEIRPVCRKFMQDPMEIFVDDETKL--TLHGLQQYYVKLKDNEKNRKLFDLL--------DVL---------------: 247
SecStr          :HHHTS SSS--EEEEEES  - TTTHHHHHTT SS EEE   SGGG --S TTEEEEEEE  HHHHHHHHHHHH--------HHS---------------:    
ExpBur          :beeebeeeb--bbbbbbbbb-eeebbebbeebbeebbebeeeeeeeb--bbeebebbbbebeeeebbeebbebb--------eeb---------------:    

queryA       486:SEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP: 585
                :                      *  **      *  * *    *          *     *      **      **    * *  *    ** **  * :
8enk_B_1     248:-------------------EFNQVVIFVKSVQRCIALAQLLVEQN---------FPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVN: 319
SecStr          :-------------------  SEEEEE SSHHHHHHHHHHHHHTT---------  EEEE TTS HHHHHHHHHHHHTTS SEEEE GGGSSS   TTEE:    
ExpBur          :-------------------ebebbbbbbeeeebbeebbeebeeee---------bebbbbbeebebeebbeebeebeeeeeebbbbbebbbbbbebeebb:    
Contact         :                             bb                             bb      b                 bbb           

queryA       586:YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE: 624
                :   *   *     * **  * **    ****  *  *  :
8enk_B_1     320:IAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEND: 358
SecStr          :EEEESS  SSHHHHHHHHTTSSGGG  EEEEEEE SHHH:    
ExpBur          :bbbbbbbbeebbbbbbbbbbbbbeeeebbbbbbbbeeeb:

Input Residue Numbers for Focused Sites

ex) 2,15,123