[pdbjlvh2]Protein Model on 7ymf_A_1_B

Protein Model on 7ymf_A_1_B_1 (TEMPLATE: 7ymf )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(DDX1_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [263 aa]	ATP-dependent RNA helicase DDX3X :DDX3X_HUMAN
2	b		B 1 (B)	polymer(polypeptide(L)) [154 aa]	ATP-dependent RNA helicase DDX3X :DDX3X_HUMAN	362S(D) 363Q(F) 365R(K) (identity: 0.0 %/36.1 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7ymf_A_1 identity=36.1%

queryA         1:MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGS: 100
                :   **       *    *      **  *   ** *    *    * ****** **  *     *                                   :
7ymf_A_1      68:IESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIY-----------------------------------: 132
SecStr          : SSGGGS  HHHHHHHHHHHT  S  HHHHHHHHHHHTT  EEEE  TTSSHHHHHHHHHHHHHH-----------------------------------:    
ExpBur          :beebeebebeebbeebbeebebeebbbbbeebbbbbeeebbbbbbbeebbbbbbbbbbbbbbbbb-----------------------------------:    

queryA       101:AFAIGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDK: 200
                :                                                                                                    :
7ymf_A_1      -1:----------------------------------------------------------------------------------------------------:  -1
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

queryA       201:GHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNA--------------: 286
                :                                                                                                    :
7ymf_A_1     133:--------------------------------------------------------------------------------------SDGPGEALRAXXXX: 146
SecStr          :--------------------------------------------------------------------------------------HH S TTT  ----:    
ExpBur          :--------------------------------------------------------------------------------------eebbeeeeee----:    
Contact         :                                                                                           bb       

queryA       287:---------PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLS: 377
                :         *  *   * **** *       *         *     **     *   ** *    * ***** *    **  *     *******  * :
7ymf_A_1     147:XXXXXXKQYPISLVLAPTRELAVQIYEEARKFSY---RSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLD: 243
SecStr          :------ B  SEEEE SSHHHHHHHHHHHHHHST---TSS  EEEE SSS HHHHHHHHTT  SEEEE HHHHHHHHHTT B  TT  EEEE SHHHHHH:    
ExpBur          :------ebebbbbbbbbbeebbbebbebbebbbb---ebebebbbbeeeeebbebbeebeebbebbbbbbebbbebbeeeebbbeebebbbbbbbbebbe:    
Contact         :        b                                                                           bb b            

queryA       378:QGYSDFINRMHNQ: 390
                : *    * *   *:
7ymf_A_1     244:MGFEPQIRRIVEQ: 256
SecStr          :TT HHHHHHHHHS:    
ExpBur          :eebeeebbebbee:

Protein Model on 7ymf_A_1_B_1 (TEMPLATE: 7ymf )

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