Protein Model on 7v2y_F_1_B_1
(TEMPLATE: 
7v2y
)Protein Model on 7v2y_F_1_B_1
(TEMPLATE: 7v2y
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(DDX1_HUMAN) | F 1 (F) | polymer(polypeptide(L)) [376 aa] | ATP-dependent RNA helicase SUB2 :SUB2_YEAST | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [1226 aa] | THO complex subunit 2 :THO2_YEAST | 5S(K) 6E(D) 7M(F) 8G(L) 9V(L) 11P 15Q(R) 19E(D) 25P 30A(Q) 34P 35L(Q) 38G(H) 62Q 312Y 468D(E) 472K(R) 474N(K) 475T(N) 476R 479A 501I(L) 502K(D) 504H(L) 505K(E) 506M(F) 507D(N) 517I(T) 518D(R) 521N(E) 525Y(L) 537G(A) 538H(S) 563K(D) 564G(F) 565D(E) 566V(K) 567R 583G(R) 585P(N) (identity: 20.0 %/31.2 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:7v2y_F_1 identity=31.2% |
queryA 4:FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA: 103
:* ** * * * ** * *** * * *** * * :
7v2y_F_1 64:FKDFLLKPELSRAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTAVFVLSTLQ-----------------------------------------: 122
SecStr :SGGG TTTTHHHHHHT S TTHHHHHHHHHTT EEEE TTSSSHHHHHHHHHH-----------------------------------------:
ExpBur :beebebeeebbebbeebeeeebeebbeebbeebeeeebbbbbbeeeeebbbbbbbbbbe-----------------------------------------:
Contact : bbbbb b b b b b bb b b
queryA 104:IGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHV: 203
: :
7v2y_F_1 -1:----------------------------------------------------------------------------------------------------: -1
SecStr :----------------------------------------------------------------------------------------------------:
ExpBur :----------------------------------------------------------------------------------------------------:
queryA 204:KFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKF----LPNAPKALIVEPSRELA: 299
: * ****:
7v2y_F_1 123:-------------------------------------------------------------------------------QLDPVPGEVAVVVICNARELA: 143
SecStr :-------------------------------------------------------------------------------H TT EEEE S HHHH:
ExpBur :-------------------------------------------------------------------------------ebeeeeeebbbbbbbeeeeeb:
queryA 300:EQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN---GVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTS: 396
: * * * ** * ** * * *** ***** ** ** * * ** * * * * * :
7v2y_F_1 144:YQIRNEYLRFSKYM--PDVKTAVFYGGTPISKDAELLKNKDTAPHIVVATPGRLKALVREKYIDLSHVKNFVIDECDKVLEELD---MRRDVQEIFRATP: 238
SecStr :HHHHHHHTTTTTT --SS EEEE TTS HHHHHHHHHSGGG SEEEE HHHHHHHHTTT SS EEEEESHHHHHSSSH---HHHHHHHHHHSS :
ExpBur :eebeebbeebbeeb--eebebbbbeeeeeeeebbeebeeeeebbbbbbbbbebbebbeeeeebebeebebbbbbbbbebbeeee---eeebbeebbeebe:
Contact : b
queryA 397:DGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEY: 496
: * ** **** * * * * * * * :
7v2y_F_1 239:RDK--QVMMFSATL-SQEIRPICRRFLQNP-----------------LEIFVXXXXXXXXXGLQQYYIKLEE---REKNRKLA-----------------: 298
SecStr :SSS--EEEEEES - TTTHHHHTTS SS -----------------EE --------- EEEEEE S---TTTTTSHH-----------------:
ExpBur :eeb--bbbbbbeeb-eeebeeebeebbeee-----------------eeeee---------eeebebbebee---eebeeebe-----------------:
Contact : b b bbb b
queryA 497:AVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEK: 596
: * *** * * ** * ** ** * *** ***** ** * * :
7v2y_F_1 299:--QLLDDLEFNQVIIFVKSTTRANELTKLL---------NASNFPAITVHGHMKQEERIARYKAFKDFEKRICVSTDVFGRGIDIERINLAINYDLTNEA: 387
SecStr :--HHHTTS S EEEE S SSHHHHHHHHH---------HTTT EEE SSSS HHHHHHHHHHHHTTS SEEEE GGGGSS TT EEEESS SSS:
ExpBur :--ebbeebebebbbbbbeeeeebeebbeeb---------eeeeeebbbbbeeeeeeeeeeeeeebeeeeeebbbbbeebbeeeebeebbbbbbbbbbeeb:
Contact : bb bbbb bb b b bb bbbbb b b
queryA 597:QNYVHRIGRVGRAERMGLAISLVATEKEK: 625
: * ** ** ** ***** * :
7v2y_F_1 388:DQYLHRVGRAGRFGTKGLAISFVSSKEDE: 416
SecStr :TTHHHHTTSSSGGG EEEEEE SSSHH:
ExpBur :ebbeebbebbeeeeeebbbbbbbbeeebe:
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[assembly_id:1]
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