Protein Model on 7liu_A_1_C_1
(TEMPLATE: 
7liu
)Protein Model on 7liu_A_1_C_1
(TEMPLATE: 7liu
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(DDX1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [442 aa] | ATP-dependent RNA helicase DDX3X :DDX3X_HUMAN | |
| 2 | b | C 1 (X) | polymer(polydeoxyribonucleotide/polyribonucleotide hybrid) | 5'-R(*GP*GP*GP*CP*GP*GP*G)-D(P*CP*CP*CP*GP*CP*CP*C)-3' | 294P 295S(T) 296R 324I(Y) 325G 326G 346T 347P 348G 349R 352D 374G(R) 377S(D) 379G 380Y(F) 383F(Q) 514R(E) 515T 516K 546H 547G 554R 572T 573D(A) 574V 598N(E) (identity: 65.4 %/34.7 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:7liu_A_1 identity=34.7% |
queryA 287:PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR: 386
:* * * **** * * * ** * ** * * ***** * ** * ******* * * * *:
7liu_A_1 135:PISLVLAPTRELAVQIYEEARKFSY---RSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRR: 231
SecStr : SEEEE SSHHHHHHHHHHHHHHTT---TSS EEEE TTS HHHHHHHHHT SEEEE HHHHHHHHTTTSB TT EEEEETHHHHTSTTTHHHHHH:
ExpBur :bbbbbbbbbebbbebbbebbebbbb---ebebebbbbbbeeeeeebbeebeebbebbbbbbebbbebbeeebbbbeebebbbbbbbbebbeeeeeeebbe:
Contact : bbb bbb bbbb b b b bb b
queryA 387:MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWS: 486
: * * * *** ** * * * * :
7liu_A_1 232:IVEQ-DTMPPKGVR-HTMMFSAT---------------FPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKV------------------------VWV: 290
SecStr :HHTS-SS BTTB-EEEEEES --------------- HHHHHHGGGG SS EEEESSSTT TTEEEEE------------------------EE :
ExpBur :bbee-eebbeeeeb-bbbbbbbb---------------beeebbeebeebbeebbbbbbbeebbbbebbebeb------------------------eeb:
queryA 487:EAIKILKGEYAVRAIKEHKMDQ-AIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP: 585
:* * * * ** * ** * * **** * * * * * * ***** ** * :
7liu_A_1 291:EESD--KRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEG---------YACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVK: 379
SecStr : HHH--HHHHHHHHHHHS SS EEEEE SSHHHHHHHHHHHHHTT--------- EEEE TTS HHHHHHHHHHHHHTSS EEEE GGGTSS TTEE:
ExpBur :eeee--beeebbebbeeeeeebbbbbbbeeeeebeebbeebeeee---------bebbbbbeeeebeebeebbeebeeeebebbbbbebbbbbbebeebe:
Contact : bbb bb b bbb
queryA 586:YVINVTLPDEKQNYVHRIGRVGRAERMGLAISL: 618
: *** ** ******* ** *** * :
7liu_A_1 380:HVINFDLPSDIEEYVHRIGRTGRVGNLGLATSF: 412
SecStr :EEEESS SSHHHHHHHHTTSS SS EEEEEE:
ExpBur :bbbbbbbbeebeebbbbbbbbbbebeebebbbb:
Contact : b
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[assembly_id:1]
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