[pdbjlvh2]Protein Model on 7liu_A_1_B

Protein Model on 7liu_A_1_B_1 (TEMPLATE: 7liu )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(DDX1_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [442 aa]	ATP-dependent RNA helicase DDX3X :DDX3X_HUMAN
2	b		B 1 (B)	polymer(polypeptide(L)) [442 aa]	ATP-dependent RNA helicase DDX3X :DDX3X_HUMAN	494G(R) 523E 524Q(D) 525Y(F) 527I(Y) 528Q(H) 529Q(E) 542C 549R 552H(R) 553E(D) 556Q(E) (identity: 25.0 %/34.7 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7liu_A_1 identity=34.7%

queryA       287:PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR: 386
                :*  *   * **** *       *         *     **     *   ** *    * ***** *    **  *     *******  *  *    * *:
7liu_A_1     135:PISLVLAPTRELAVQIYEEARKFSY---RSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRR: 231
SecStr          : SEEEE SSHHHHHHHHHHHHHHTT---TSS  EEEE TTS HHHHHHHHHT  SEEEE HHHHHHHHTTTSB  TT  EEEEETHHHHTSTTTHHHHHH:    
ExpBur          :bbbbbbbbbebbbebbbebbebbbb---ebebebbbbbbeeeeeebbeebeebbebbbbbbebbbebbeeebbbbeebebbbbbbbbebbeeeeeeebbe:    

queryA       387:MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWS: 486
                :   *       * *      ***               **        *         *  *                                    * :
7liu_A_1     232:IVEQ-DTMPPKGVR-HTMMFSAT---------------FPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKV------------------------VWV: 290
SecStr          :HHTS-SS   BTTB-EEEEEES ---------------  HHHHHHGGGG SS EEEESSSTT   TTEEEEE------------------------EE :    
ExpBur          :bbee-eebbeeeeb-bbbbbbbb---------------beeebbeebeebbeebbbbbbbeebbbbebbebeb------------------------eeb:    

queryA       487:EAIKILKGEYAVRAIKEHKMDQ-AIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP: 585
                :*     *             *     *  **   * **      *           *   ****    *   *  *  *    *  * ***** **  * :
7liu_A_1     291:EESD--KRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEG---------YACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVK: 379
SecStr          : HHH--HHHHHHHHHHHS SS EEEEE SSHHHHHHHHHHHHHTT---------  EEEE TTS HHHHHHHHHHHHHTSS EEEE GGGTSS   TTEE:    
ExpBur          :eeee--beeebbebbeeeeeebbbbbbbeeeeebeebbeebeeee---------bebbbbbeeeebeebeebbeebeeeebebbbbbebbbbbbebeebe:    
Contact         :       b                             bbb bbb            b      b  bb  b                             

queryA       586:YVINVTLPDEKQNYVHRIGRVGRAERMGLAISL: 618
                : ***  **     ******* **    *** * :
7liu_A_1     380:HVINFDLPSDIEEYVHRIGRTGRVGNLGLATSF: 412
SecStr          :EEEESS  SSHHHHHHHHTTSS SS  EEEEEE:    
ExpBur          :bbbbbbbbeebeebbbbbbbbbbebeebebbbb:

Protein Model on 7liu_A_1_B_1 (TEMPLATE: 7liu )

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