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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(DDX1_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [212 aa] | Eukaryotic initiation factor 4A-I :IF4A1_MOUSE | |
2 | b | F 1 (B) | non-polymer(SO4) | SULFATE ION | 389N(Q) 390Q(K) (identity: 0.0 %/32.8 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7ddx_B_1 identity=32.8% |
queryA 3:AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF: 102 : * * * ** * * ** * * *** * * * ** * : 7ddx_B_1 37:SFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQ------------------------------: 106 SecStr : GGGTT HHHHHHHHHHT S HHHHHHHHHHHTT EEEE TTSSHHHHHHHHHHHH TTS S ------------------------------: ExpBur :bbeebebeeebbbbbeeeeeeebeebbbbbbebbeeeebbbbebeeeeebbbbbbbbbbeebeeeeebbb------------------------------: queryA 103:AIGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGH: 202 : : 7ddx_B_1 -1:----------------------------------------------------------------------------------------------------: -1 SecStr :----------------------------------------------------------------------------------------------------: ExpBur :----------------------------------------------------------------------------------------------------: queryA 203:VKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQT: 302 : * ** * **** * : 7ddx_B_1 104:-----------------------------------------------------------------------------------ATQALVLAPTRELAQQI: 120 SecStr :-----------------------------------------------------------------------------------S EEEE SSHHHHHHH: ExpBur :-----------------------------------------------------------------------------------bbbbbbbbbeeebbeeb: queryA 303:LNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE-NGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRL: 401 : * *** * * * ****** * * ****** ** * * * * : 7ddx_B_1 121:QKVVMALGDYMGASCHA---CIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNT------: 211 SecStr :HHHHHHHTTTTT EEE---E TTS HHHHHHHHHH SEEEE HHHHHHHHHTTSS TT EEEETTHHHHHHTT HHHHHHHHHHS TT ------: ExpBur :eebbeebbeebebbbbb---bbeeeeeeebbeebeeeebbbbbbbbebbbebbeeeebeeeebebbbbbbbbebbeeebeeebbebbeebeeeb------: Contact : bb queryA 402:QVIVCSATLHSFDVKKLSEKIMHFPTWV: 429 :** *** * ** * * * : 7ddx_B_1 212:QVVLLSATMPS-DVLEVTKKFMRDPIRI: 238 SecStr :EEEEE SS H-HHHHHHHHH S EEE: ExpBur :bbbbbbeeeee-ebeebbeeebeebbeb: |