Protein Model on 6y53_D_1_S_1 (TEMPLATE: 6y53 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(DDX1_HUMAN) D 1 (p) polymer(polypeptide(L)) [394 aa] Probable ATP-dependent RNA helicase DDX46 :DDX46_HUMAN
2 b S 1 (2) polymer(polyribonucleotide) U2 snRNA 15Q(N) 18E(K) (identity: 0.0 %/32.1 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6y53_D_1 identity=32.1%
queryA         1:MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGS: 100
                :       *    *           ** **   ** *  * *    * ****** **  *          **     *   *                   :
6y53_D_1     371:IKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLP----MFRHIMDQRSLEEGEGPI-------------------: 447
SecStr          : SSGGGSS  HHHHHHHHHHT SS  HHHHHHHHHHHTT  EEEE  TTS HHHHHHHH----HHHHHHHS     TT  S-------------------:    
ExpBur          :beeeeeeeeeeeeeeeeeeeeeeeebeebbeebeeeeeebbbeeeeeeeeeeeeeeeee----eebeeeeeeeeeeeeeee-------------------:    
Contact         :              b  b                                                                                  

queryA       101:AFAIGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDK: 200
                :                                                                                                    :
6y53_D_1      -1:----------------------------------------------------------------------------------------------------:  -1
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

queryA       201:GHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAE: 300
                :                                                                                      * * *  * **** :
6y53_D_1     446:--------------------------------------------------------------------------------------PIAVIMTPTRELAL: 459
SecStr          :-------------------------------------------------------------------------------------- SEEEE SSHHHHH:    
ExpBur          :--------------------------------------------------------------------------------------eeeebbbeeeeebe:    

queryA       301:QTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVS--TGKL-NLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSD: 397
                :*     * * *      **     **     *   *  *  * * ****  *      *   **  *   ******     *      *       *  *:
6y53_D_1     460:QITKECKKFSKTLG---LRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRI---VDNVRPD: 553
SecStr          :HHHHHHHHHTTTSS---       TTS HHHHHHHHHT  SEEEE HHHHHHHHHTTSS   SSSS SEEEEESHHHHTSSSSHHHHHHH---HHSS SS:    
ExpBur          :eeeeeeeeeeeeee---eeeeeeeeeeeeeebeeeeeeeeebbebbeeeeeebeeeeeebeeeeebeebeebebeeebebeebbeeeeee---eeeebee:    

queryA       398:GKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYA: 497
                :    *    ***        *   *   *  *   *   *   *   *         *       *                       *          :
6y53_D_1     554:---RQTVMFSATFPR-AMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGH---------------------YQES---------: 619
SecStr          :--- EEEEEES   H-HHHHHHTTTSSS EEE SS TT   SSEEEEEEE  SSHHHHHHHHHHHT---------------------SS S---------:    
ExpBur          :---bbeebbbeeeee-ebeeeebeebeeebeebeeebeeeeeebeeeeeeeeeeeeeeeeeeeeee---------------------beee---------:    

queryA       498:VRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQ: 597
                :            ***       * *                   *  ***      *      ** *    *  * ***** *      * *   *    :
6y53_D_1     620:---------GSVIIFVDKQEHADGLLKDLMRA---------SYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYE: 701
SecStr          :---------SSEEEE SSHHHHHHHHHHHHHT---------T  EEEE SSS HHHHHHHHHHHHHTS SEEEE TTSSSS   SS  EEEE S  SSHH:    
ExpBur          :---------eebebbeeeeeeeeeebeebeee---------ebeebeeeeeeeeeebeebeebeeeeebbbbbebeeeeeeeeeeebebbebeeeeeeee:    

queryA       598:NYVHRIGRVGRAERMGLAISLVATEKEK: 625
                : **** ** ***   * *          :
6y53_D_1     702:DYVHRAGRTGRAGNKGYAYTFITEDQAR: 729
SecStr          :HHHHHHHTSS TT  EEEEEEE SS  S:    
ExpBur          :ebbbbeebbeeeeeeebebebeeeeeee:

Input Residue Numbers for Focused Sites

ex) 2,15,123