[pdbjlvh2]Protein Model on 6l5n_A_1_E

Protein Model on 6l5n_A_1_E_1 (TEMPLATE: 6l5n )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(DDX1_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [377 aa]	Nucleolar RNA helicase 2 :DDX21_HUMAN
2	b		E 1 (A)	non-polymer(ANP)	PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER	20M(V) 22W(F) 24L(F) 29Q 47E(R) 48T 49G 50S(T) 51G 52K 53T 54G(F) 371E 408A 578G 580D 605R 608R 609A (identity: 68.4 %/34.5 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:6l5n_A_1 identity=34.5%

queryA        20:MDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEW: 119
                :   * *  ***        * *    * ** ***  * ** *      * *   *                                             :
6l5n_A_1      20:VTFLFP--IQAKTFHHVYSGKDLIAQARTGTGKTFSFAIPLIEKLHGELQDRKRGR--------------------------------------------:  73
SecStr          : SS  H--HHHHHHHHHHTT  EEEE  TTS HHHHHHHHHHHHHHTS     TT --------------------------------------------:    
ExpBur          :beebee--bbeebbeebeeeebbbbbbbbbeebbbbbbbbbbbbbeeeeeeeeeeb--------------------------------------------:    
Contact         :b b b    b                 bbbbbbbb                                                                 

queryA       120:HGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIP: 219
                :                                                                                                    :
6l5n_A_1      -1:----------------------------------------------------------------------------------------------------:  -1
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

queryA       220:PHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLR: 319
                :                                                                  **  *   * **** *         *     ** :
6l5n_A_1      73:-----------------------------------------------------------------RAPQVLVLAPTRELANQVSKDFSDITK-----KLS: 102
SecStr          :-----------------------------------------------------------------   SEEEE SSHHHHHHHHHHHHTT S-----SS :    
ExpBur          :-----------------------------------------------------------------bbbbbbbbbbbebbbebbbebbeebbe-----ebe:    

queryA       320:ELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLS: 419
                :     **     *     ** ** ******  *    *** *      **** *  *  *  *             *     *    ***          :
6l5n_A_1     103:VACFYGGTPYGGQFERURNGIDILVGTPGRIKDHIQNGKLDLTKLKHVVLDEVDQULDUGFADQVEEILSVAYKKDSEDNP-QTLLFSATC---------: 192
SecStr          :EEEE TTS HHHHHHHHHH  SEEEE HHHHHHHHHTT    TT SEEEETTHHHHTSTTTHHHHHHHHTTT  TT TTS -EEEEEES  ---------:    
ExpBur          :bbbbbbeeeeeebeeebeebbbbbbbbbebbeebeeeeebebeebebbbbbbbbebbeeebeeebeebbeebbeeeeeebb-bbbbbbbbb---------:    
Contact         :                                                   b                                    b           

queryA       420:EKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC: 519
                :      * **          *   *        *       *  *       *            *             *    *     **** **   :
6l5n_A_1     193:------PHWVFNVAKKYUKSTYEQV--------DLIGKKTQKTAITVEHLAIKCH----------WTQRAAVIGD--VIRVYSGHQ-GRTIIFCETKKEA: 265
SecStr          :------ HHHHHHHGGGS TT EEE--------ESS SSS SS TTEEEEEEE  ----------HHHHHHHHHH--HHHHHS TT- EEEEE SSHHHH:    
ExpBur          :------eeebbeebeebbeeeeeeb--------eebeeeeeebbeebebbbbebe----------eeebbeebbe--bbeeebeee-ebbbbbbeeeeeb:    

queryA       520:DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV: 619
                :  * *          *   *     ****     *   *  *  *    *  * ***** **  *  **    *     * ** ** *** * *  *   :
6l5n_A_1     266:QELSQ------NSAIKQDAQ----SLHGDIPQKQREITLKGFRNGSFGVLVATNVAARGLDIPEVDLVIQSSPPKDVESYIHRSGRTGRAGRTGVCICFY: 355
SecStr          :HHHHH------STTTGGGEE----EESTTS HHHHHHHHHHHHHTS SEEEE GGGTSS   TTEEEEEESS  SSHHHHHHHHTTSS TT  EEEEEEE:    
ExpBur          :eebbe------eebbeeebe----bbbeebebeebeebbebbeeeebbbbbbbebbbbbbebeebebbbbbbbbeebebbbbbbbbbbbeeeebbbbbbb:    
Contact         :                                                          b b                        b  bb          

queryA       620:ATEKE: 624
                :    *:
6l5n_A_1     356:QHKEE: 360
SecStr          : GGGH:    
ExpBur          :beebe:

Protein Model on 6l5n_A_1_E_1 (TEMPLATE: 6l5n )

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