[pdbjlvh2]Protein Model on 5gju_A_1_B

Protein Model on 5gju_A_1_B_1 (TEMPLATE: 5gju )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(DDX1_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [199 aa]	ATP-dependent RNA helicase DeaD :DEAD_ECOLI
2	b		B 1 (A)	non-polymer(AMP)	ADENOSINE MONOPHOSPHATE	4F 22W(Y) 24L(K) 26T(S) 29Q 48T 49G 50S 51G 52K 53T (identity: 72.7 %/39.2 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:5gju_A_1 identity=39.2%

queryA         4:FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA: 103
                :*   *    *  *        *  **** **  * * ***  * ****** *** *  *     **  *                               :
5gju_A_1       3:FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQNLDPELKAPQ-------------------------------:  71
SecStr          :TGGGT  HHHHHHHHHHT  S  HHHHHHHHHHHTT  EEE   TTS HHHHHHHHHHHTS TT  S  -------------------------------:    
ExpBur          :beebebeeebeebbeeeeeeebbebbeebbebbbeeebbbbbbeeeeebbbbbbbbbbeebeeeeebbb-------------------------------:    
Contact         :b                 b b b  b                  bbbbbb                                                  

queryA       104:IGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHV: 203
                :                                                                                                    :
5gju_A_1      -1:----------------------------------------------------------------------------------------------------:  -1
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

queryA       204:KFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTL: 303
                :                                                                                  **  *   * **** *  :
5gju_A_1      69:----------------------------------------------------------------------------------APQILVLAPTRELAVQVA:  86
SecStr          :----------------------------------------------------------------------------------S  EEEE SSHHHHHHHH:    
ExpBur          :----------------------------------------------------------------------------------bbbbbbbbbeeebbeebb:    

queryA       304:NNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV: 403
                :     * *         *          **  *  *  ********* *    * * **    *******  *  *          ***         * :
5gju_A_1      87:EAMTDFSKHMRGVNVVALYXXXXXXV--QLRALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEGH------QT: 178
SecStr          :HHHHHHTTTSTT  EEEE ------ --HHHHHHT  SEEEE HHHHHHHHHHTSS  TT  EEEEESHHHHHHTT HHHHHHHHHTS SS ------EE:    
ExpBur          :ebbeebbebbeebebbbbe------e--beebbeebbbbbbbbbeebbebeeeeebebeebebbbbbbbbebeeeeeeeebeebbeebeeeb------bb:    

queryA       404:IVCSATLHSFDVKKLSEKIMHFPTWV: 429
                :   ***             *  *  *:
5gju_A_1     179:ALFSATMPE-AIRRITRRFMKEPQEV: 203
SecStr          :EEE SS  H-HHHHHHHHH SS EEE:    
ExpBur          :bbbbbebee-bbeebbeebbeeeeeb:

Protein Model on 5gju_A_1_B_1 (TEMPLATE: 5gju )

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