Protein Model on 2zu6_A_1_B_1
(TEMPLATE: 
2zu6
)Protein Model on 2zu6_A_1_B_1
(TEMPLATE: 2zu6
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(DDX1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [343 aa] | Eukaryotic initiation factor 4A-I :IF4A1_HUMAN | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [284 aa] | Programmed cell death protein 4 :PDCD4_HUMAN | 260K(Q) 295S(T) 296R 297E 329A(V) 346T 348G 349R 352D 374G(E) 377S 378Q(R) 379G 380Y(F) 408A 409T 410L(M) 435D(E) 437V(T) 514R(N) 515T 516K(R) 517I(R) 572T 574V(L) 575A(L) 577R 594D(T) 595E(N) 596K(R) 597Q(E) 598N 600V(I) 629H(D) 637G(T) 638C(F) 639Y 640N (identity: 42.1 %/32.7 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:2zu6_A_1 identity=32.7% |
queryA 249:FPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE-NGVDIVVGTP: 347
: * * * * * * * ** * **** * * *** * * * ****:
2zu6_A_1 46:LPCIKGYDVIAQAQSG-TGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHA---CIGGTNVRAEVQKLQMEAPHIIVGTP: 141
SecStr :S S EEEE TT-STTSHHHHHHHHTT TT S EEEE SSHHHHHHHHHHHHHHHHHHT EEE--- STTHHHHHHHHHHH SEEEE H:
ExpBur :eeeeeeebbbbebeeb-bbebeebbbebbebbeeeeebbbbbbbbbeeebbeebbeebbeebeeeebebbb---bebeeeeeebbeebeeeebbbbbbbb:
Contact : b bbb b b
queryA 348:GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP: 447
:** * * ****** ** * * * * ** *** * ** * * * * * :
2zu6_A_1 142:GRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNT------QVVLLSATMPS-DVLEVTKKFMRDPIRILVKKEELTLEGIRQFYIN: 234
SecStr :HHHHHHHTTTSS STT EEEEETHHHHHHTT HHHHHHHHHTS TT ------EEEEEESS H-HHHHHHHHH SS EEEEE EESTTEEEEEE :
ExpBur :eebeebbeeeebeeeebebbbbbbbbebbeeebeeebeebeeebeeeb------bbbbbbeeeee-ebeebbeebbeeeeebbeeeeeeebeebebbebe:
Contact :bb b b bbbb bbb b b
queryA 448:VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHG: 547
:* ** * * * * * ** ** * * * * * :
2zu6_A_1 235:V--------ER------------------------EEWK--LDTLCDLYETLTIT-----QAVIFINTRRKVDWLTEKM---------HARDFTVSAMHX: 286
SecStr : --------SS------------------------HHHH--HHHHHHHHHHTT S-----SEEEE S HHHHHHHHHTT---------TTTT EE -:
ExpBur :b--------ee------------------------eeeb--bebbbebbeeeebe-----ebbbbbeeeeebeebbeeb---------eeeebebeebe-:
Contact : bbbb
queryA 548:DRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE: 645
: * * * * ** ** ***** * *** ** ** ***** ** * ** * * *** *:
2zu6_A_1 287:XXXXXXRDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGXKGVAINMVTEEDKRTLRDI-----ETFYNTSIEE: 379
SecStr :------ HHHHHTGGGSSS EEEE HHHHTTS TTS SEEEESS SSTHHHHHHH EETTT - EEEEEE HHHHHHHHHH-----HHHHT EE:
ExpBur :------eeeeeeeeeeeeeebebbbbebbeebebbebebbbbbbbbeeeebbbebbbbbeeee-ebebbbbbbeeeeeebeeb-----beebebebee:
Contact : b bb b bbbbb b b bbbb
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[assembly_id:1]
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