Protein Model on 2hyi_E_1_F_1
(TEMPLATE: 
2hyi
)Protein Model on 2hyi_E_1_F_1
(TEMPLATE: 2hyi
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(DDX1_HUMAN) | E 1 (C) | polymer(polypeptide(L)) [392 aa] | Probable ATP-dependent RNA helicase DDX48 :DDX48_HUMAN | |
| 2 | b | F 1 (D) | polymer(polypeptide(L)) [56 aa] | Protein CASC3 :CASC3_HUMAN | 333L(I) 334S(R) 337E(D) 338N(Y) 357G(R) 359L 360N(R) 361L(T) 362S(R) 385N(Y) 388H(Y) 389N(R) 390Q(Y) 391I(L) 392P 393Q(P) 420E(N) 421K 422I(F) 423M 424H(T) 458R 483E 484M(E) 486S(K) 514R(N) 515T 517I(R) 518D(K) 521N(W) 591T(D) 593P 594D(N) 595E(N) 620A(K) 623K(D) 626V(I) 629H(D) 630V(I) (identity: 20.5 %/34.4 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:2hyi_E_1 identity=34.4% |
queryA 3:AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF: 102
: * ** * ** * * * ** * *** *** * * :
2hyi_E_1 39:TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQ----------------------------------------: 98
SecStr :SGGGS HHHHHHHHHHT S HHHHHHHHHHHHT EEEE TTSSHHHHHHHHHHH----------------------------------------:
ExpBur :ebeebebeeebbebbeeeeeeebbebbbebbebbeeeebbbbbbebbbebebbbbbbbbb----------------------------------------:
queryA 103:AIGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGH: 202
: :
2hyi_E_1 -1:----------------------------------------------------------------------------------------------------: -1
SecStr :----------------------------------------------------------------------------------------------------:
ExpBur :----------------------------------------------------------------------------------------------------:
queryA 203:VKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP---------KALIVE: 293
: *** :
2hyi_E_1 99:-------------------------------------------------------------------------------------CLDIQVRETQALILA: 113
SecStr :-------------------------------------------------------------------------------------T TTS S EEEE :
ExpBur :-------------------------------------------------------------------------------------ebebeeeebbbbbbb:
Contact : bb
queryA 294:PSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQ: 393
:* **** * * *** * * * ***** * * ******* * * * * :
2hyi_E_1 114:PTRELAVQIQKGLLALGDYMN---VQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPP: 210
SecStr :SSHHHHHHHHHHHHHHTTTTT--- EEEE TTS HHHHHHHHHH SEEEE HHHHHHHHHTTSS TT EEEEETHHHHTSTTTHHHHHHHHTTS T:
ExpBur :bbebbbebbbebbeebbeebe---bebbbbbbeeeeeebeeebeebbbbbbbbbebbeebbeeebbebeebebbbbbbbbebbeeeeeeebeebeeebee:
Contact : bb bb b bbbb b bbbbbb
queryA 394:VTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILK: 493
: * ** **** * * * * * * ** * * * :
2hyi_E_1 211:AT------QVVLISATL-PHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAV--------ER------------------------EEWK--FDTLC: 269
SecStr :T ------EEEEEES - HHHHHHGGGT SS EEE GGG S TTEEEEEEEE--------SS------------------------THHH--HHHHH:
ExpBur :eb------bbbbbbbbb-beebbebbeebbeebbebbbeeeebbbeebebbbbeb--------ee------------------------eeeb--bebbb:
Contact : bbbbb b bb b
queryA 494:GEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLP: 593
: * * ** *** ** * * * *** ** * * * ** *** *** * * ** **:
2hyi_E_1 270:DLYDTLTIT-----QAVIFCNTKRKVDWLTEKM---------REANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLP: 355
SecStr :HHHGGGTTS-----EEEEE S HHHHHHHHHHH---------HTTT EEE TTS HHHHHHHHHHHHHTS EEEE GGGTSS TTEEEEEESS :
ExpBur :ebbebbeeb-----bbbbbbeeeebbeebbebb---------eeeebebbbbbeebebeebeebbeebeeeebebbbbbebbbbbbebeebebbbbbbbb:
Contact : bb bb b b b
queryA 594:DEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE: 645
: * ***** ** * * ** * * * *:
2hyi_E_1 356:NNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDI-----EQYYSTQIDE: 402
SecStr :SSHHHHHHHHTTSSGGG EEEEEEEEGGGHHHHHHH-----HHHHT EEE:
ExpBur :eeebbbbbbbbbbbbeeeebebbbbbeeeeeeebeeb-----beebebebee:
Contact :bb b b b bb
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[assembly_id:1]
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