CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(DDX1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [207 aa] | heat resistant RNA dependent ATPase :O07897_THETH | |
2 | b | B 1 (A) | non-polymer(PO4) | PHOSPHATE ION | 48T 49G 50S(T) 51G 52K 53T (identity: 83.3 %/37.1 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:2gxu_A_1 identity=37.1% |
queryA 4:FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA: 103 :* *** * ** *** ** * * * * ** *** ** * * * * * : 2gxu_A_1 3:FKDFPLKPEILEALHGRGLTTPTPIQAAALPLALEGKDLIGQARTGTGKTLAFALPIAERLAPS---QERGRKPRALVLT--------------------: 79 SecStr :GGGSS HHHHHHHHHTT S HHHHHHHHHHHTT EEEE TTS HHHHHHHHHHHH --- - SEEEE --------------------: ExpBur :beebebbeebeebbeeeeeeebeebbeebbeebbeeebbbbbbeeeeebebbbbbbbbeebeee---ee-ebebbbbbbb--------------------: Contact : bbbbbb queryA 104:IGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHV: 203 : : 2gxu_A_1 -1:----------------------------------------------------------------------------------------------------: -1 SecStr :----------------------------------------------------------------------------------------------------: ExpBur :----------------------------------------------------------------------------------------------------: queryA 204:KFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTL: 303 : * ** * **** * : 2gxu_A_1 73:-----------------------------------------------------------------------------------PRALVLTPTRELALQVA: 89 SecStr :----------------------------------------------------------------------------------- SEEEE SSHHHHHHHH: ExpBur :-----------------------------------------------------------------------------------bbbbbbbbeeebbeebb: queryA 304:NNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV: 403 : * * ** * * * * ** **** * * * ** * ****** ** * * * : 2gxu_A_1 90:SELTAVA-----PHLKVVAVYGGTGYGKQKEALLRGADAVVATPGRALDYLRQGVLDLSRVEVAVLDEADEMLSMGFEEEVEALLSATP------PSRQT: 178 SecStr :HHHHHH -----TTS EEEE SSS SHHHHHHHHH SEEEE HHHHHHHHHHTSS TT SEEEEESHHHHHHTT HHHHHHHHHHS ------TTSEE: ExpBur :eebeebb-----ebbebbbbbeeeeeeebeebbeebbbbbbbbbebbbebeeeebbebeebebbbbbebbebeeeeeeeebeebbeebe------eebbb: queryA 404:IVCSATLHSFDVKKLSEKIMHFPTWVDL: 431 : **** * * * * * * : 2gxu_A_1 179:LLFSATLPSW-AKRLAERYMKNPVLINV: 205 SecStr :EEE SS HH-HHHHHHHH SS EEEE : ExpBur :bbbbeebeeb-beebbeebbeeeeebee: |