Protein Model on 7uah_B_1_E_1 (TEMPLATE: 7uah )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(TMPS2_HUMAN) B 1 (B) polymer(polypeptide(L)) [250 aa] Plasminogen :PLMN_HUMAN
2 b E 1 (B) non-polymer(M63) (6S,9R,19S,22R)-N-{[4-(aminomethyl)phenyl]methyl}-22-[(3-chlorobenzene-1-sulfonyl)amino]-3,12,21-trioxo-2,6,9,13,20-pentaazatetracyclo[22.2.2.2~6,9~.2~14,17~]dotriaconta-1(26),14,16,24,27,29-hexaene-19-carboxamide 296H 345D 419L(R) 435D 436S 437C 438Q 441S(A) 459T 460S 461W 462G 463S(L) 464G 465C 472G (identity: 81.2 %/39.9 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7uah_B_1 identity=39.9%
queryA       255:RIVGGESALPGAWPWQVSLHVQ-NVHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFYGAGYQVEKVISHPNYDSKTKNNDIALMKLQK: 353
                :* ***  * *  *******      * ***  * ***  ***** **                           *      *         **** **  :
7uah_B_1      20:RVVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCLEKSPRPSSYKVILGAHQEVNLEPHVQEIEVSRLFLEPT------RKDIALLKLSS: 113
SecStr          :  BSSEE  TTSSTTEEEEEETTS EEEEEEEEETTEEEE GGGGTT   GGGEEEEES SB STT TT EEEEEEEEEE TT------  S EEEEESS:    
ExpBur          :ebbbebebeebbbbbbbbbbbeeeebebbbbbbbeebbbbbbebbeebeeeebbbbbbbbbeeeeebeeebebebeebbebee------eebbbbbebee:    
Contact         :                                          b                                                b        

queryA       354:PLTFNDLVKPVCLPNPGMMLQPEQLCWISGWGATEEKGKTSEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDSCQGDSGGPLVTSKNNIW: 453
                :*    * * * *** *         * * *** *         *  *    **   **              *** * *  ****** *****       :
7uah_B_1     114:PAVITDKVIPACLPSPNYVVADRTECFITGWGETQGTFGAG-LLKEAQLPVIENKVCNRYEFLNGRVQSTELCAGHLAGGTDSCQGDAGGPLVCFEKDKY: 212
SecStr          :    BTTB   B   TT    TT EEEEEES   SSSS TT-B EEEEEEEE HHHHTSTTTTTT   TTEEEE  TTSS B  TTTTT EEEEEETTEE:    
ExpBur          :ebeeeeebbbbbebeeeeebeeeeebbbbbbbebeeeeeee-ebbbbbbbbbebeebeeeebbeeebeebbbbbbeeebeebbbebbebbbbbbeeeeeb:    
Contact         :                                                                 b               bbbb  b            

queryA       454:WLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMR: 489
                : * * **** ***    ****  *  *  **   **:
7uah_B_1     213:ILQGVTSWGLGCARPNKPGVYVRVSRFVTWIEGVMR: 248
SecStr          :EEEEEEEE SSSS TT  EEEEEGGGTHHHHHHHHH:    
ExpBur          :bbbbbbbeeeebbeeeebbbbbbbbebbeebebbee:    
Contact         :     bbbbbbb      b                                                                                 


Input Residue Numbers for Focused Sites

ex) 2,15,123