[pdbjlvh2]Protein Model on 5wi6_B

Protein Model on 5wi6_B_1 (TEMPLATE: 5wi6 )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(TMPS2_HUMAN)	B 1 (B)	polymer(polypeptide(L)) [244 aa]	Tryptase alpha/beta-1 :TRYB1_HUMAN

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:5wi6_B_1 identity=40.3%

queryA       256:IVGGESALPGAWPWQVSLHVQN---VHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFY-GAGYQVEKVISHPNYDSKTKNNDIALMKL: 351
                :****  *    ******* *      * **** * * *  ******           *    **     *      *   * **         ****  *:
5wi6_B_1       1:IVGGQEAPRSKWPWQVSLRVHGPYWMHFCGGSLIHPQWVLTAAHCVGPDVKD---LAALRVQLREQHLYYQDQLLPVSRIIVHPQFYTAQCGADIALLEL:  97
SecStr          : BSSEE  TTS TTEEEEEE SSS EEEEEEEEEETTEEEE HHHH SS   ---GGGEEEEE  SBTTTT  EEEEEEEEE TT S GGGS   EEEEE:    
ExpBur          :bbeeeebeeeebbbbbbbbeeeeeeebebbbbbbbeebbbbbbebbbeeeee---eeebebbbbbbebeeeeeebebeeebebeebeebeebbbbbbbeb:    

queryA       352:QKPLTFNDLVKPVCLPNPGMMLQPEQLCWISGWGATE--EKGKTSEVLNAAKVLLIETQRCNSRYVYD-------NLITPAMICAGFLQGNVDSCQGDSG: 442
                :  *      *  * **       *   **  ***     *       *   **   *   *   *                * ***      ********:
5wi6_B_1      98:EEPVNVSSHVHTVTLPPASETFPPGMPCWVTGWGDVDNDERLPPPFPLKQVKVPIMENHICDAKYHLGAYTGDDVRIVRDDMLCAG--NTRRDSCQGDSG: 195
SecStr          :SS     SSS   B   TT    TT EEEEEES  SBTTB   TT B EEEEEEEE HHHHHHHHHTT  S TTS SS TTEEEE -- SSSB  TT TT:    
ExpBur          :eeebeeeeebeebebbeeeeebeeebebbbbbbbbbeeeeebeeeebbbbbebebbebeebbeebbeeeeeeeeeebbeebbbbbb--eeeebbbeebbb:    

queryA       443:GPLVTSKNNIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYR: 486
                :****   *  *   *  *** ***   *** *  *    ***  :
5wi6_B_1     196:GPLVCKVNGTWLQAGVVSWGEGCAQPNRPGIYTRVTYYLDWIHH: 239
SecStr          : EEEEEETTEEEEEEEEEE SSSS TT  EEEEETGGGHHHHHT:    
ExpBur          :bbbbbebeeeebbbbbbbbeeebbeeebbbbbbbbbebbebbee:

Protein Model on 5wi6_B_1 (TEMPLATE: 5wi6 )

Input Residue Numbers for Focused Sites