[pdbjlvh2]Protein Model on 2gdd_D_1_C

Protein Model on 2gdd_D_1_C_1 (TEMPLATE: 2gdd )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TMPS2_HUMAN)	D 1 (D)	polymer(polypeptide(L)) [243 aa]	Tryptase beta-2 :TRYB2_HUMAN
2	b		C 1 (C)	polymer(polypeptide(L)) [243 aa]	Tryptase beta-2 :TRYB2_HUMAN	319F(H) 320M(L) 321F(Y) 322Y 392K(P) 393T(P) 394S(P) 395E(F) (identity: 12.5 %/40.3 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:2gdd_D_1 identity=40.3%

queryA       256:IVGGESALPGAWPWQVSLHVQN---VHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFY-GAGYQVEKVISHPNYDSKTKNNDIALMKL: 351
                :****  *    ******* *      * **** * * *  ******           *    **     *      *   * **         ****  *:
2gdd_D_1       1:IVGGQEAPRSKWPWQVSLRVHGPYWMHFCGGSLIHPQWVLTAAHCVGPDVKD---LAALRVQLREQHLYYQDQLLPVSRIIVHPQFYTAQIGADIALLEL:  97
SecStr          : BS EE  TTS TTEEEEEE SSS EEEEEEEEEETTEEEE HHHH SS   ---GGGEEEE   SBTTTS   EEEEEEEE TT S TTTS   EEEEE:    
ExpBur          :bbeeeebeeeebbbbbbbbeeeeeeebebbbbbbeeebbbbbbebbbeeeee---eeebebbbbbbbbeeeeeeeebeebbebeebeebeebbbbbbbeb:    
Contact         :                       b                                          bbbb                              

queryA       352:QKPLTFNDLVKPVCLPNPGMMLQPEQLCWISGWGATE--EKGKTSEVLNAAKVLLIETQRCNSRYVYD-------NLITPAMICAGFLQGNVDSCQGDSG: 442
                :  *      *  * **       *   **  ***     *       *   **   *   *   *                * ***      ********:
2gdd_D_1      98:EEPVKVSSHVHTVTLPPASETFPPGMPCWVTGWGDVDNDERLPPPFPLKQVKVPIMENHICDAKYHLGAYTGDDVRIVRDDMLCAG--NTRRDSCQGDSG: 195
SecStr          :SS     SSS   B   TT    TT EEEEEES  SBTTB   TT B EEEEEEEE HHHHHHHHHTTS S TTS SS TTEEEE -- SS B  TT TT:    
ExpBur          :eeebeeeeebeebebbeeeeebeeebebebbbbbbbeeeeebeeeebbbbbebebeebeebbeebbeeeeeeeeeebbeebbbbbb--eeeebbbeebbb:    
Contact         :                                          bbbb                                                      

queryA       443:GPLVTSKNNIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYR: 486
                :****   *  *   *  *** ***   *** *  *    ***  :
2gdd_D_1     196:GPLVCKVNGTWLQAGVVSWGEGCAQPNRPGIYTRVTYYLDWIHH: 239
SecStr          : EEEEE SSSEEEEEEEEE SSSSBTTB EEEEETGGGHHHHHT:    
ExpBur          :bbbbbebeeeebbbbbbbbeeebbeeebbbbbbebbebbebbee:

Protein Model on 2gdd_D_1_C_1 (TEMPLATE: 2gdd )

Input Residue Numbers for Focused Sites