[pdbjlvh2]Protein Model on 2f9p_E_1_G

Protein Model on 2f9p_E_1_G_1 (TEMPLATE: 2f9p )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TMPS2_HUMAN)	E 1 (C)	polymer(polypeptide(L)) [243 aa]	Tryptase alpha-1
2	b		G 1 (D)	polymer(polypeptide(L)) [242 aa]	Tryptase alpha-1	319F(H) 320M(L) 321F(Y) 322Y 387T(V) 389E 392K(P) 393T(P) 394S(P) 395E(F) (identity: 20.0 %/40.3 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:2f9p_E_1 identity=40.3%

queryA       256:IVGGESALPGAWPWQVSLHVQN---VHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFY-GAGYQVEKVISHPNYDSKTKNNDIALMKL: 351
                :****  *    ******* *      * **** * * *  ******                **     *      *   * **         ****  *:
2f9p_E_1       1:IVGGQEAPRSKWPWQVSLRVRDRYWMHFCGGSLIHPQWVLTAAHCVGPDVKD---LATLRVQLREQHLYYQDQLLPVSRIIVHPQFYIIQTGADIALLEL:  97
SecStr          : BS EE  TTS TTEEEEEEESSSEEEEEEEEEEETTEEEE GGGG SS   ---GGGEEEEES SBTTTT   B EEEEEE TT  SS  TT  EEEEE:    
ExpBur          :bbebeebeeeebbbbbbbbeeeeebebebbbbbbeeebbbbbbebbbeeeee---eeebebbbbbbebeeeeeeeebeeebebeebeeebebbbbbbbbb:    
Contact         :                      bb                                          bbbb                              

queryA       352:QKPLTFNDLVKPVCLPNPGMMLQPEQLCWISGWGATE--EKGKTSEVLNAAKVLLIETQRCNSRYVYD-------NLITPAMICAGFLQGNVDSCQGDSG: 442
                :  *      *  * **       *   **  ***     *       *   **   *   *   *            *   * ***  *   *** ****:
2f9p_E_1      98:EEPVNISSRVHTVMLPPASETFPPGMPCWVTGWGDVDNDEPLPPPFPLKQVKVPIMENHICDAKYHLGAYTGDDVRIIRDDMLCAGNSQR--DSCKGDSG: 195
SecStr          :SS     SSS   B   TT    TT  EEEEESS SBTTB   TT B EEEE  EE HHHHHHHHHTT  S TTS  S TTEEEE  SS --B  TTTTT:    
ExpBur          :eeebeeeeebeebebbeeebebeeebebebbbbbbeeeeeebeeeebbbbbebebeebeebbeebbeeeeeeeeeebbeebbbbbbeeee--bbbebbbb:    
Contact         :                                   b   b  bbbb                                                      

queryA       443:GPLVTSKNNIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYR: 486
                :****   *  *   *  *** ***   *** *  *    ***  :
2f9p_E_1     196:GPLVCKVNGTWLQAGVVSWGEGCAQPNRPGIYTRVTYYLDWIHH: 239
SecStr          : EEEEEETTEEEEEEEEEE SSSSBTTB EEEEEGGGGHHHHTT:    
ExpBur          :bbbbbebeeeebbbbbbbeeeebbeeebbbbbbbbbebbebbee:

Protein Model on 2f9p_E_1_G_1 (TEMPLATE: 2f9p )

Input Residue Numbers for Focused Sites