[pdbjlvh2]Protein Model on 1utj_A_1_C

Protein Model on 1utj_A_1_C_1 (TEMPLATE: 1utj )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TMPS2_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [222 aa]	TRYPSIN I :TRY1_SALSA
2	b		C 1 (A)	non-polymer(CA)	CALCIUM ION	308W(E) 310A(N) 314I(V) 316R(E) 319F(E) (identity: 0.0 %/42.1 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:1utj_A_1 identity=42.1%

queryA       256:IVGGESALPGAWPWQVSLHVQNVHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFYGAGYQVEKVISHPNYDSKTKNNDIALMKLQKPL: 355
                :****    *   * ****     * ****     * * ****                    *  *         ** **** *    *** * ** ** :
1utj_A_1      21:IVGGYECKPYSQPHQVSLN-SGYHFCGGSLVNENWVVSAAHCYKSRVEVRLGEHNIK-VTEGSEQFISS----SRVIRHPNYSSYNIDNDIMLIKLSKPA: 114
SecStr          : BS EE  TTSSTTEEEEE-SSSEEEEEEE SSSEEEE GGG  SS EEEES SBTT-S  S  EEEEE----EEEEE TT BTTTTBT  EEEEESS  :    
ExpBur          :bbeeeebeeeebebbbbbb-eeebebbbbbbeeebbbbbbebeeeebebebbbbbbe-eeeebbbebeb----eebbebeeeeeeeebbbbbbbebeeeb:    
Contact         :                                                    b b   b b  b                                    

queryA       356:TFNDLVKPVCLPNPGMMLQPEQLCWISGWGATEEKGKTSEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDSCQGDSGGPLVTSKNNIWWL: 455
                :* *  * ** **           *  **** *      *  *            **  *     ** ** *** * *  ********** *        *:
1utj_A_1     115:TLNTYVQPVALPTS--CAPAGTMCTVSGWGNTMSSTADSNKLQCLNIPILSYSDCNNSY--PGMITNAMFCAGYLEGGKDSCQGDSGGPVVCNGE----L: 206
SecStr          :  SSS    B  SS--   TT EEEEEESS   SSS  TTB EEEEEEB  HHHHHHHS--TTT  TTEEEES TT S B  TTSTT EEEETTE----E:    
ExpBur          :eeeeebeebeebee--ebeeebebbbbbbbebeeeeeeeeebbbbebbbbeeeebeebb--eeebeebbbbbbeeebeebbbeebbbbbbbbeeb----b:    

queryA       456:IGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMRA: 490
                : *  *** ***    ****  *  * **    *  :
1utj_A_1     207:QGVVSWGYGCAEPGNPGVYAKVCIFNDWLTSTMAS: 241
SecStr          :EEEEEE SSSS TT  EEEEEGGG HHHHHHHHHH:    
ExpBur          :bbbbbbeeebbeeeebbbbbebbebeebbeebbee:

Protein Model on 1utj_A_1_C_1 (TEMPLATE: 1utj )

Input Residue Numbers for Focused Sites