[pdbjlvh2]Protein Model on 1p2o_A_1_B

Protein Model on 1p2o_A_1_B_1 (TEMPLATE: 1p2o )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1] [assembly_id:3]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TMPS2_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [238 aa]	Chymotrypsinogen A :CTRA_BOVIN
2	b		B 1 (B)	polymer(polypeptide(L)) [58 aa]	Pancreatic trypsin inhibitor :BPT1_BOVIN	278V(F) 279H 280V(F) 281C 296H 297C 337Y 340K(L) 342K(I) 392K(N) 393T 437C 438Q(M) 439G 440D 441S 459T(V) 460S 461W 462G (identity: 65.0 %/41.0 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:1p2o_A_1 identity=41.0%

queryA       256:IVGGESALPGAWPWQVSLHVQN-VHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQ-SFMFYGAGYQVEKVISHPNYDSKTKNNDIALMKLQK: 353
                :** ** * ** *******      * **** *   * ******              **   * *           **     * * * **** * **  :
1p2o_A_1      16:IVNGEEAVPGSWPWQVSLQDKTGFHFCGGSLINENWVVTAAHCGVTTSD-----VVVAGEFDQGSSSEKIQKLKIAKVFKNSKYNSLTINNDITLLKLST: 110
SecStr          : BT EE  TTSSTTEEEEE TT  EEEEEEEEETTEEEE GGG   TTS-----EEEES SBTT SSS  EEEEEEEEEE TT  TTT  S  EEEEESS:    
ExpBur          :bbeeeebeebbbbbbbbbbeeeeebebbbbbbeeebbbbbbebebeeeb-----ebbbbbbbeeeeeeeeeebebeeebebeebeeeeebbbbbbbebee:    
Contact         :                       bbbb              bb                                        b  b b           

queryA       354:PLTFNDLVKPVCLPNPGMMLQPEQLCWISGWGATE-EKGKTSEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDSCQGDSGGPLVTSKNNI: 452
                :   *   *  ****           *   *** *      *   *  *   *     *         *  ******     * ** ********  **  :
1p2o_A_1     111:AASFSQTVSAVCLPSASDDFAAGTTCVTTGWGLTRYXXANTPDRLQQASLPLLSNTNC--KKYWGTKIKDAMICAG--ASGVSSCMGDSGGPLVCKKNGA: 206
SecStr          :    BTTB   B   TT    TT EEEEEES  S  --    SB EEEEEEB  HHHH--HHHHGGG  TTEEEEE-- SS B  TT TT EEEEEETTE:    
ExpBur          :ebeeeeebbbbbebeeeeebeeeeebbbbbbbbeee--eeebeebbbbebebbeeeeb--eeebeeebeebbbbbb--eeebbbbebbebbbbbbeeeeb:    
Contact         :                                       bb                                           bbbbb           

queryA       453:WWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMRAD: 491
                :* * *  ****       ****  *     *      * :
1p2o_A_1     207:WTLVGIVSWGSSTCSTSTPGVYARVTALVNWVQQTLAAN: 245
SecStr          :EEEEEEEEE  TT  TTSEEEEEEGGGTHHHHHHHHHT :    
ExpBur          :bbbbbbbbeebeebeeebbbbbbebbebbebbeebbeee:    
Contact         :      bbbb

Protein Model on 1p2o_A_1_B_1 (TEMPLATE: 1p2o )

Input Residue Numbers for Focused Sites