[pdbjlvh2]Protein Model on 1dlk_D_2_C

Protein Model on 1dlk_D_2_C_2 (TEMPLATE: 1dlk )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TMPS2_HUMAN)	D 2 (D)	polymer(polypeptide(L)) [230 aa]	Thrombin heavy chain :CTRA_BOVIN
2	b		C 2 (C)	polymer(polypeptide(L)) [13 aa]	Thrombin light chain :CTRA_BOVIN	260E 263L(V) 264P 266A(S) 267W 268P 269W 359D(Q) 360L(T) 363P(A) 364V 365C 378L(T) 380W(V) 399A(Q) 401K(S) 452I(A) 453W (identity: 44.4 %/41.0 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:1dlk_D_2 identity=41.0%

queryA       256:IVGGESALPGAWPWQVSLHVQN-VHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQ-SFMFYGAGYQVEKVISHPNYDSKTKNNDIALMKLQK: 353
                :** ** * ** *******      * **** *   * ******              **   * *           **     * * * **** * **  :
1dlk_D_2       1:IVNGEEAVPGSWPWQVSLQDKTGFHFCGGSLINENWVVTAAHCGVTTSD-----VVVAGEFDQGSSSEKIQKLKIAKVFKNSKYNSLTINNDITLLKLST:  95
SecStr          : BT EE  TTSSTTEEEEE TT  EEEEEEEEETTEEEE GGG   TTS-----EEEES SBTT S S  EEEEEEEEEE TT  TTT TT  EEEEESS:    
ExpBur          :bbeeeebeeeebbbbbbbbeeeeebebbbbbbeeebbbbbbebebeeeb-----bbbbebbbbeeeeeeeeebebeeebebeebeeeeebbbbbbbebee:    
Contact         :    b  bb bbbb                                                                                      

queryA       354:PLTFNDLVKPVCLPNPGMMLQPEQLCWISGWGATE-EKGKTSEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDSCQGDSGGPLVTSKNNI: 452
                :   *   *  ****           *   *** *      *   *  *   *     *         *  ******     * ** ********  **  :
1dlk_D_2      96:AASFSQTVSAVCLPSASDDFAAGTTCVTTGWGLTRYTNANTPDRLQQASLPLLSNTNC--KKYWGTKIKDAMICAG--ASGVSSCMGDSGGPLVCKKNGA: 191
SecStr          :    BTTB   B   TT    TT EEEEEE   SSTT SS  SB EEEEEEB  HHHH--HHHHGGG  TTEEEEE-- SS B  TT TT EEEEEETTE:    
ExpBur          :ebeeeeebeebeebeeeeebeeeeebbbbbbbbeeeeeeeebeebbbbebebbebeeb--eeebeeebeebbbbbb--eeebbbbebbbbbbbbbeeeee:    
Contact         :     bb  bbb            b b                   b b                                                  b

queryA       453:WWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMRAD: 491
                :* * *  ****       ****  *     *      * :
1dlk_D_2     192:WTLVGIVSWGSSTCSTSTPGVYARVTALVNWVQQTLAAN: 230
SecStr          :EEEEEEEEE  TT  TTSEEEEEEGGGTHHHHHHHHHT :    
ExpBur          :ebbbbbbbbeeeebeeeebbbbbebbebbeebeebbeee:    
Contact         :b

Protein Model on 1dlk_D_2_C_2 (TEMPLATE: 1dlk )

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