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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TMPS2_HUMAN) | D 2 (D) | polymer(polypeptide(L)) [230 aa] | Thrombin heavy chain :CTRA_BOVIN | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [230 aa] | Thrombin heavy chain :CTRA_BOVIN | 278V(F) 279H 280V(F) 297C 298V(G) 300K(T) 333S(K) 338D(N) 339S 340K(L) 341T 390K(N) 391G(A) 393T 418N(T) 419L(K) 463S 464G(S) (identity: 33.3 %/41.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:1dlk_D_2 identity=41.0% |
queryA 256:IVGGESALPGAWPWQVSLHVQN-VHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQ-SFMFYGAGYQVEKVISHPNYDSKTKNNDIALMKLQK: 353 :** ** * ** ******* * **** * * ****** ** * * ** * * * **** * ** : 1dlk_D_2 1:IVNGEEAVPGSWPWQVSLQDKTGFHFCGGSLINENWVVTAAHCGVTTSD-----VVVAGEFDQGSSSEKIQKLKIAKVFKNSKYNSLTINNDITLLKLST: 95 SecStr : BT EE TTSSTTEEEEE TT EEEEEEEEETTEEEE GGG TTS-----EEEES SBTT S S EEEEEEEEEE TT TTT TT EEEEESS: ExpBur :bbeeeebeeeebbbbbbbbeeeeebebbbbbbeeebbbbbbebebeeeb-----bbbbebbbbeeeeeeeeebebeeebebeebeeeeebbbbbbbebee: Contact : bbb bb b b bbbb queryA 354:PLTFNDLVKPVCLPNPGMMLQPEQLCWISGWGATE-EKGKTSEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDSCQGDSGGPLVTSKNNI: 452 : * * **** * *** * * * * * * * ****** * ** ******** ** : 1dlk_D_2 96:AASFSQTVSAVCLPSASDDFAAGTTCVTTGWGLTRYTNANTPDRLQQASLPLLSNTNC--KKYWGTKIKDAMICAG--ASGVSSCMGDSGGPLVCKKNGA: 191 SecStr : BTTB B TT TT EEEEEE SSTT SS SB EEEEEEB HHHH--HHHHGGG TTEEEEE-- SS B TT TT EEEEEETTE: ExpBur :ebeeeeebeebeebeeeeebeeeeebbbbbbbbeeeeeeeebeebbbbebebbebeeb--eeebeeebeebbbbbb--eeebbbbebbbbbbbbbeeeee: Contact : b bb b bb queryA 453:WWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMRAD: 491 :* * * **** **** * * * : 1dlk_D_2 192:WTLVGIVSWGSSTCSTSTPGVYARVTALVNWVQQTLAAN: 230 SecStr :EEEEEEEEE TT TTSEEEEEEGGGTHHHHHHHHHT : ExpBur :ebbbbbbbbeeeebeeeebbbbbebbebbeebeebbeee: Contact : bb |