Protein Model on 7s5e_D_1_N_1 (TEMPLATE: 7s5e )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(PALS1_HUMAN) D 1 (D) polymer(polypeptide(L)) [207 aa] Guanylate kinase :B2FT06_STRMK
2 b N 1 (D) non-polymer(AGS) PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER 488Q(S) 489N(G) 490C(A) 491G 492Q(K) 493N(S) 494E(S) 608L(R) 612E(R) 623E(R) 645N 646S(E) 647D(V) 648L(F) (identity: 14.3 %/30.3 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7s5e_D_1 identity=30.3%
queryA       483:ILIGPQNCGQNELRQRLMNKEKDRFASAVPHTTRSRRDQEVAGRDYHFVSRQAFEADIAAGKFIEHGEFEKNLYGTSIDSVRQVINSGKICLLSLRTQSL: 582
                :*   *   *                *     * *  *  ** *  *****   **  **** * **        **   **      *   **    *  :
7s5e_D_1      26:IVAAPSGAGKSSIVNATLARDP-QIALSISFTSRAMRPGEVNGQHYHFVSAEKFEQMIAAGDFFEHAWVHGDWKGTARQSVEPQLAAGQDVLLEIDWQGA: 124
SecStr          :EEE  TTSSHHHHHHHHHHH T-TEEE   EE S   TT  BTTTBEE  HHHHHHHHHHT EEEEEEETTEEEEEEGGGTHHHHHTT EEEE   HHHH:    
ExpBur          :bbbbbebbebeebbeebbeebe-ebeebebbbbbeeeeebeeeeeeebeeeeebeebeeeeebbbebebeeebbbbbeeebeeebeebbbbbbebbeebb:    
Contact         :     bbbbbbb                                                                                        

queryA       583:KTLRNSDLKPYIIFIAPPSQERLRALLAKEGKNPKPEELREIIEKTREMEQNNGHYFDTAIVNSDLDKAYQELLRLIN: 660
                :   *         ** ***   *     * *                **   *   **  ***   * *  **     :
7s5e_D_1     125:QQVRQLVPGTVTVFILPPSKQALQDRMRKRGQDSEAVIAQRLGAARDEMLHFN--EFDYVIVNEVFDTAVDELCAIFT: 200
SecStr          :HHHHHH TT EEEEEE SSHHHHHHHHHHHT S HHHHHHHHHHHHHHHTTGG--G SEEEE SSHHHHHHHHHHHHH:    
ExpBur          :eebeeebeebbbbbbebeeeebbeeebeeeeeeeeeebeeebeebeeeeebbe--ebeeebebeeeeebbeebbebbe:    
Contact         :                         b   b          b                     bbbb                                  


Input Residue Numbers for Focused Sites

ex) 2,15,123