#WARNING:no index is registered index "YP_009725311.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725311.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 5ynn_A_1_C_1

Protein Model on 5ynn_A_1_C_1 (TEMPLATE: 5ynn )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) A 1 (A) polymer(polypeptide(L)) [295 aa] nsp16 protein :K0BWD0_9BETC
2 b C 1 (A) non-polymer(SFG) SINEFUNGIN 43N 71G 72A 73G 74S 80P 98S(N) 99D 100L 101N 113G 114D 115C 130D 131M 132Y (identity: 93.8 %/66.1 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5ynn_A_1 identity=66.1%
queryA         1:SSQAWQPGVAMPNLYKMQRMLLEKCDLQNYGDSATLPKGIMMNVAKYTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDL: 100
                : *  * ** *** * * *   ** * * **  *   * *  ** *** ******** ***** ************** **** ********     * **:
5ynn_A_1       1:ASADWKPGHAMPSLFKVQNVNLERCELANYKQSIPMPRGVHMNIAKYMQLCQYLNTCTLAVPANMRVIHFGAGSDKGIAPGTSVLRQWLPTDAIIIDNDL: 100
SecStr          : HHHHSSEEE  HHHHT          TTTT     GGG  HHHHHHHHHHHHHTTS     TT EEEEES   TTSB HHHHHHHHHS TT EEEEEES:    
ExpBur          :eeebeebbbebeeebbeeeeeeeebebebeeeebebeeeeeeeebbbbbbbbbbeebebbbbeebbbbbbbbeeeeeebbbbebbeebbbeebebbbbbe:    
Contact         :                                          b                           bbbb     b                 bbb

queryA       101:NDFVSDADSTLIGDCATVHTANKWDLIISDMYDPKTKNVTKENDSKEGFFTYICGFIQQKLALGGSVAIKITEHSWNADLYKLMGHFAWWTAFVTNVNAS: 200
                :* ****** ** *** **      ** ******* *****  * **  **** *  *   ****************   ** *** ***** * ** ***:
5ynn_A_1     101:NEFVSDADITLFGDCVTVRVGQQVDLVISDMYDPTTKNVTGSNESKALFFTYLCNLINNNLALGGSVAIKITEHSWSVELYELMGKFAWWTVFCTNANAS: 200
SecStr          :S  B S SEEEES GGGEEE S EEEEEE    GGGGS  SS     TTHHHHHHHHHHSEEEEEEEEEEE SSS  HHHHHHGGGEEEEEEEEESTTTT:    
ExpBur          :eebeeebeeebeeebebbebeeebbbbbbbbeeeebeeeeeebeeeeebbebbbebbeeebbbbbbbbbbbbbbbbbeebbebbbbbbebbbbbbbbbbb:    
Contact         :b           bbb              bbb                                                                    

queryA       201:SSEAFLIGCNYLGKPREQIDGYVMHANYIFWRNTNPIQLSSYSLFDMSKFPLKLRGTAVMSLKEGQINDMILSLLSKGRLIIRENNRVVISSDVL: 295
                :*** ** * ****   * ***  **********  *  ** ***** *** *** ** *  *** ***    **** * * ** *     * ***:
5ynn_A_1     201:SSEGFLLGINYLGTIKENIDGGAMHANYIFWRNSTPMNLSTYSLFDLSKFQLKLKGTPVLQLKESQINELVISLLSQGKLLIRDNDTLSVSTDVL: 295
SecStr          :SS EEEEEEEE SS SS   HHHHHHHHHHHHHH       GGGS  TT S       EE   GGG  HHHHHHHHTT  EES  S   EEE   :    
ExpBur          :ebbbbbbbbbbbeeeeeebebebbbbbbbebbeeeebeebbebbeeeeebebeeeebebeeeeeeeeeeebeeebeebebbbbbeeebebeeeee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123