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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(DDX1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [451 aa] | Pre-mRNA-processing ATP-dependent RNA helicase PRP5 :PRP5_YEAST | |
2 | b | C 1 (A) | non-polymer(MG) | MAGNESIUM ION | 53T 370D 371E (identity: 100.0 %/31.1 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:4ljy_A_1 identity=31.1% |
queryA 26:TDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCRAT: 125 :* ** * * * ** ****** * * : 4ljy_A_1 75:TPIQSQALPAIUSGRDVIGISKTGSGKTISYLLPLLRQV-------------------------------------------------------------: 113 SecStr : HHHHHHHHHHHTT EEEE TTS HHHHHHHHHHHHH-------------------------------------------------------------: ExpBur :ebbbbbbbbbbbbbebbbbbbeeebebebbbbbbbbebb-------------------------------------------------------------: Contact : b queryA 126:KGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQ: 225 : : 4ljy_A_1 -1:----------------------------------------------------------------------------------------------------: -1 SecStr :----------------------------------------------------------------------------------------------------: ExpBur :----------------------------------------------------------------------------------------------------: queryA 226:ALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNA------------PKALIVEPSRELAEQTLNNIKQFKKYI: 313 : * ** * **** * * : 4ljy_A_1 114:-------------------------------------------------------------KAQRPLSKHETGPUGLILAPTRELALQIHEEVTKFTEA-: 151 SecStr :-------------------------------------------------------------HTS TT SEEEE SSHHHHHHHHHHHHHHHTT-: ExpBur :-------------------------------------------------------------eebeebeeebbbbbbbbbbbeeeebeebeebbeebbee-: queryA 314:DNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVST--GK-LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRL----QVIVC: 406 : * ** * * * *** **** * ** * * * **** * * ** * * * : 4ljy_A_1 152:-DTSIRSVCCTGGSEUKKQITDLKRGTEIVVATPGRFIDILTLNDGKLLSTKRITFVVUDEADRLFDLGFE----------PQITQIUKTVRPDKQCVLF: 240 SecStr :- TT EEEESS S THHHHHHHTT SEEEE HHHHHHHTTHHHHTSS STT EEEETTHHHHHHTT H----------HHHHHHHHHS TT EEEEE: ExpBur :-eeebebbbbbeeeeeeebbeebeebbbbbbbbbebbbebeeeeeeebbebebbbbbbbbbbbebbeeeee----------eebeebbeebbeebbbbbb: Contact : bb queryA 407:SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKM: 506 :*** * * * * * * * * * : 4ljy_A_1 241:SATFPN-KLRSFAVRVLHSPISITINSKGUVNENVKQKFRICHSEDEKFDNLVQLIHERS----------------EFFDEVQSXXXXXXXXXXXXDAK-: 322 SecStr :ES H-HHHHHHHHHSSS EEEEESSS SS TTSEEEEEEESSHHHHHHHHHHHHHHHH----------------HHHHHHT ------------ -: ExpBur :beebee-ebeebbeebbeeebbbebeeeeebeeebebebebbeeeeebbeebbebbeebe----------------eebeeeee------------eeb-: queryA 507:DQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRV: 606 : **** ** * * ** *** ** * ** * ** * ** *** ** : 4ljy_A_1 323:--AIIFVSSQNICDFISKKLLNAG---------IVTCAIHAGKPYQERLUNLEKFKREKNSILLCTEVLSRGLNVPEVSLVIIYNAVKTFAQYVHTTGRT: 411 SecStr :--EEEEES HHHHHHHHHHHHHTT--------- EEE TTS HHHHHHHHHHHHHSTT EEEEEHHHHHT SEEEESS SSHHHHHHHHGGG: ExpBur :--bbbbbeeeeebeebeeebeeee---------bebbbbbeebeeeeeeebbeebeeeeebbbbbbbebbeebebeebbbbbbbbbbeebeebeebbebb: queryA 607:GRAERMGLAISLV: 619 : * * * ** * : 4ljy_A_1 412:ARGSRSGTAITLL: 424 SecStr : GGG EEEEEE: ExpBur :eeeeebbbbbbbb: |