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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(DDX1_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [363 aa] | PUTATIVE ATP-DEPENDENT RNA HELICASE MJ0669 :H669_METJA | |
2 | b | G 1 (B) | non-polymer(SO4) | SULFATE ION | 45A(Q) 409T 410L(U) (identity: 33.3 %/36.2 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:1hv8_B_1 identity=36.2% |
queryA 4:FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGG-DVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF: 102 :* * * * ***** *** * * ****** * ** * * * : 1hv8_B_1 8:FNELNLSDNILNAIRNKGFEKPTDIQUKVIPLFLNDEYNIVAQARTGSGKTASFAIPLIELVNEN-----------------------------------: 72 SecStr :GGGSS HHHHHHHHHHT S HHHHHHHHHHHHT SEEEEE SSSSHHHHHHHHHHHHS SS-----------------------------------: ExpBur :beebebeeebbebbeeeeeeebbbbbbebbeebbeeeebbbbbbbeebebbbbbbbbbbbebeee-----------------------------------: Contact : b queryA 103:AIGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGH: 202 : : 1hv8_B_1 -1:----------------------------------------------------------------------------------------------------: -1 SecStr :----------------------------------------------------------------------------------------------------: ExpBur :----------------------------------------------------------------------------------------------------: queryA 203:VKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQT: 302 : * * * * **** * : 1hv8_B_1 73:----------------------------------------------------------------------------------NGIEAIILTPTRELAIQV: 90 SecStr :----------------------------------------------------------------------------------SS EEEE S HHHHHHH: ExpBur :----------------------------------------------------------------------------------eebbbbbbbbeeebbeeb: queryA 303:LNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ: 402 : * * * * * ** * * * * ******** * * *** * ***** * * * * : 1hv8_B_1 91:ADEIESLK---GNKNLKIAKIYGGKAIYPQIKALKNA-NIVVGTPGRILDHINRGTLNLKNVKYFILDEADEULNUGFIKDVEKILN------ACNKDKR: 180 SecStr :HHHHHHHH--- SS EEEE TTS HHHHHHHHHT -SEEEE HHHHHHHHHTTSS GGG EEEEETHHHHHTTTTHHHHHHHHH------TS SS E: ExpBur :beebeebb---eebebebbebbeeeeeeebeeebeeb-bbbbbbbeebbebbeeeebebeebebbbbbbbbebbeeeeeeebeebbe------ebeeebb: queryA 403:VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIK: 502 : *** * * * * * * ** : 1hv8_B_1 181:ILLFSATUPR-EILNLAKKYUGDYSFIKAKINANIEQSYVEV-----------------------------------NENERFEALCRLLK---------: 235 SecStr :EEEEESS H-HHHHHHHHH SEEEEE STTTSEEEEEEE----------------------------------- GGGHHHHHHHHH ---------: ExpBur :bbbbbeeebe-ebeebbeeebeeeeebebebeebbebbbbeb-----------------------------------eeeebeebbbeebe---------: Contact : bb queryA 503:EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHR: 602 : * ** ** * * * * *** * ** * ** *** **** *** ** * **: 1hv8_B_1 236:-NKEFYGLVFCKTKRDTKELASULRDIG---------FKAGAIHGDLSQSQREKVIRLFKQKKIRILIATDVUSRGIDVNDLNCVINYHLPQNPESYUHR: 325 SecStr :-STT EEEE SSHHHHHHHHHHHTTTT--------- EEEE SSS HHHHHHHHHHHHHTSSSEEEE TTHHHH S SEEEESS SSHHHHHHH: ExpBur :-eeebbbbbbbeeeeebeebbeebeeee---------bebbbbbeebeeeebeebbeebeeeebebbbbbeebbeeeeeeebebbbbbbbbeebebbbeb: queryA 603:IGRVGRAERMGLAISLVATEKEKVWYHV: 630 :*** *** * *** * : 1hv8_B_1 326:IGRTGRAGKKGKAISIINRREYKKLRYI: 353 SecStr :STTT TTS EEEEEEESTTHHHHHHH: ExpBur :bebbeebeeebebbbbbbeebeeebeeb: |