#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [926 aa] | RNA-directed RNA polymerase :R1AB_SARS2 | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [187 aa] | Non-structural protein 8 :R1AB_SARS2 | 271L 273Y 324T 326F 328P 329L 330V 331R 332K 338V 339P 340F 341V 368F 371L 378P 379A 380M 383A 384S 386N 387L 388L 389L 390D 391K 392R 396F 398V 403N 405V 407F 509W 514L 517D 518S 666M (identity: 100.0 %/100.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:8gwo_A_1 identity=100.0% |
queryA 4:AQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFK: 103 :****************************************************************************************************: 8gwo_A_1 4:AQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFK: 103 SecStr : HHHHHH SS EEESSSSSS B B EESSS EE B B EEEEEE GGG EEEEEEEEEE HHHHHHHHHHHHHSTT SSS EEE: ExpBur :eeebbeebbeeeeeebeeeeeeeeeeebebbbbeeeeebbbbbebeeeebbbbbbbeeeeeeeebbbbbbeeeeebbeebeebbeebeebebbbebebbe: queryA 104:FRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVG: 203 :****************************************************************************************************: 8gwo_A_1 104:FRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVG: 203 SecStr : SSS EEEE SB SSBHHHHHHHHHS TTS HHHHHHHHTTSS GGGGGSSS S SSS TTHHHHHTTSHHHHHHHHHHHHHHHHHHHHTTEEE: ExpBur :eeeeeeeebbbbbbebbebbbbbbbbbbbbbeeeebebbeebbeebebbeeebbeeeebbbbbebeebbebbeebbeebbebbeebbebbeebeeebbeb: queryA 204:VLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLD: 303 :****************************************************************************************************: 8gwo_A_1 204:VLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLD: 303 SecStr :E TTTSBTTS TT EE STT EEE SHHHHHHGGGTTTTTTTGGGSSTTS TTS TT TTHHHHHHHHHSTT S SSGGG SS: ExpBur :ebbbbbbbbebbbbbbeebeeeeeeebebebbbbbbbbbbbbbbbebbebbbbeeeeeeeeeeeeeeeeeebeeebeebbeebbebbeeebbbebeebee: Contact : b b queryA 304:DRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTN: 403 :****************************************************************************************************: 8gwo_A_1 304:DRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTN: 403 SecStr :HHHHHHHHHHHHHHTTSS GGG EEEEEEEEETTEEEEEEEEEEETTTEEEE S SEES SHHHHHHHS HHHHHHTSB S SS B BSSS: ExpBur :bebbbbbbbbbbbbbebbeeebbbebeeebebeeeeeebbbbbbbebbbbbebeeeeeeeeeeeeeeebbeebbbbeeeeeeeeeebeebebebebbeee: Contact : b b bbbbb bbbb b b bbb bb bbbbbbb b b b queryA 404:NVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAG: 503 :****************************************************************************************************: 8gwo_A_1 404:NVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAG: 503 SecStr :S B EE HHHHHHHHHTT S TT S B B STTHHHHHGGGGG STTHHHHHHHHHHHS S TTS S S : ExpBur :eeeeeebeeeeebeebeebbeeeebeeeeeebeeebebeeeeeebbbebbbebebbeebbbbbbbbbbbbbbbbbbbeebeebebebeebeeeeeeeebb: Contact : b b queryA 504:FPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLK: 603 :****************************************************************************************************: 8gwo_A_1 504:FPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLK: 603 SecStr :TTGGGS HHHHHHHS HHHHHHHHHHHTSS EEEEEE BSSSS EEEEE HHHHHHHHHHHHHHHHHHTT SSSB TT STTTHHHHHHH: ExpBur :bbbeeeeebeebbeebeeeebeebbeebbebbbbbbbebebeeebeeeeeeebebebbbbbbbbbebbbbebbebbeeeeeebbbbeeeeeebbbeebbe: Contact : b b bb queryA 604:TVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTAN: 703 :****************************************************************************************************: 8gwo_A_1 604:TVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTAN: 703 SecStr :HHSSS SSB EE SSTTTS HHHHHHHHHHHT SSSS HHHHHHHHHHHHHHHTS EEE TTS B SS TTSSSHHHHHHHHHHHHHHHHH: ExpBur :ebbeebeeeebbbbebbebebbbbbbbbbbbbbbbbbbbeeebeeeeebbbbbbbbbbbbebbbbbebbbbebebbbbeebebbebbbbbbbbbbbbbbb: Contact : b queryA 704:VNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTET: 803 :****************************************************************************************************: 8gwo_A_1 704:VNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTET: 803 SecStr :HHHHHSS GGG SSHHHHHHHHHHHHHT SS HHHHHHHHHHHHHHEEEEE SS EEEEEBHHHHTTTSS SHHHHHHHHHHTS TTS EES: ExpBur :bbbbbbeebeebeeeebeebbbebbebbbeeeeeeeebbeebeebbeebbbbbbeeeebbbbbbeebbeeebbbebebbbbbbbbbbbbbbeeeebbebe: queryA 804:DLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMY: 903 :****************************************************************************************************: 8gwo_A_1 804:DLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMY: 903 SecStr : SSS S BTTBEEEEEEETTEEEEEEE HHHHHHHHHEE TTTSSSSSS HHHHHHHHTTSGGGG SSSHHHHHHHHHHHHHHHHHHHHHHHHHHSS: ExpBur :eeeebbeebeebebbebebeeeebbbbbbebbebbbbbbebeeeebeebeeebeebbebbbebbbbeeeeeeebbebbebbbebbeebbeeeeeeeeeee: queryA 904:SVMLTNDNTSRYWEPEFYEAMYTPHT: 929 :**************************: 8gwo_A_1 904:SVMLTNDNTSRYWEPEFYEAMYTPHT: 929 SecStr :S S GGGTTSTTTGGGGGSS : ExpBur :eeeeeeeeeeebbeeeebeebbeeee: |