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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | |
1 | a | A(AP3A_SARS2) | B 1 (B) | polymer(polypeptide(L)) [192 aa] | ORF3a protein :AP3A_SARS2 |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:8eqj_B_1 identity=96.5% |
queryA 40:SLPFGWLIVGVALLAVFQSASKIITLKKRWQLALSKGVHFVCNLLLLFVTVYSHLLLVAAGLEAPFLYLYALVYFLQSINFVRIIMRLWLCWKCRSKNPL: 139 :****************************************************************************************************: 8eqj_B_1 40:SLPFGWLIVGVALLAVFQSASKIITLKKRWQLALSKGVHFVCNLLLLFVTVYSHLLLVAAGLEAPFLYLYALVYFLQSINFVRIIMRLWLCWKCRSKNPL: 139 SecStr : SHHHHHHHHHHHHHHHHHTT S SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT TTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSHHH: ExpBur :eeeeeeeeebeeebeeeeeebeeeeeeeeebbeebeebeeebeebeeebbebbeebbeeeeeeeeeeeebeeeeeebeeeeeeeeebeebbeebebebbe: queryA 140:LYDANYFLCWHTNCYDYCIPYNSVTSSIVITSGDGTTSPISEHDYQIGGYTEKWESGVKDCVVLHSYFTSDYYQLYSTQLSTDTGVEHVTFFIYNKIVD: 238 :********************************** **********************************************************: 8eqj_B_1 140:LYDANYFLCWHTNCYDYCIPYNSVTSSIVITSGDXXXXXXXEHDYQIGGYTEKWESGVKDCVVLHSYFTSDYYQLYSTQLSTDTGVEHVTFFIYNKIVD: 238 SecStr :H SEEEEEE SS EEEEEE S SEEEEEEE ------- EEEETTEEEE S SEEEEE SS EEEEEEEEEE HHHH TTEEEEEEEE : ExpBur :bbebeebbbbebeeebbbbbbeeeeeebebbbbe-------eeebebeeeebeeebeeeeebbbbbeeeeeebeeeeeeeeeeeeeeebbebebeeeee: |