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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
FOCUSED SITES | template(8tbx_A auth_asym_id:A) | ||||||
SiteNum | AA | label_ seq_id |
auth_ seq_id |
AA | Sec | Exp/Bur | RelAcc |
550 | K | 346 | 550 | K | e | 35.8 |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | |
1 | a | A(DDX1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [458 aa] | ATP-dependent RNA helicase DDX1 :DDX1_HUMAN:DDX1_HUMAN |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:8tbx_A_1 identity=99.1% |
queryA 1:MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGS: 100 :*********************************************************************** : 8tbx_A_1 2:MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQ-----------------------------: 72 SecStr :THHHHTTT HHHHHHHHTTT S HHHHHHHHHHHTT EEEE TTSSHHHHHHHHHHHHHHHHHTT -----------------------------: ExpBur :eebbeebebbeebbebbeeeeeeeeeebbeebbeebeeeebbbbbbeeebebbbbbbbbbbbbbbebbeee-----------------------------: queryA 101:AFAIGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDK: 200 : : 8tbx_A_1 -1:----------------------------------------------------------------------------------------------------: -1 SecStr :----------------------------------------------------------------------------------------------------: ExpBur :----------------------------------------------------------------------------------------------------: queryA 201:GHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPN---------APKALI: 291 : ******: 8tbx_A_1 73:-------------------------------------------------------------------------------------XXXXXXXSGAPKALI: 87 SecStr :-------------------------------------------------------------------------------------------- S SEEE: ExpBur :--------------------------------------------------------------------------------------------eebbbbbb: queryA 292:VEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQI: 391 :****************************************************************************************************: 8tbx_A_1 88:VEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQI: 187 SecStr :E S HHHHHHHHHHHHHHTTT SS EEEE SSS HHHHHHHHHH SEEEE HHHHHHHHTTT S TT EEEETTHHHHHHTT HHHHHHHHHHS: ExpBur :bbbebeebeebbebbeebbeebeeeebbebbbbeeeeeeebeeebeeebbbbbbbbebbeebbeeebbebeebbbbbbbbbbebbeeeeeebbbebbeeb: queryA 392:PQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKI: 491 :**************************************** ********************************************************: 8tbx_A_1 188:PQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLXXXXSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKI: 287 SecStr : SB TTS B EEEEEESSSS HHHHHHHHHH SS EEE ---- SSEEEEEEEE TTT GGGGTSSSS STTSSS STT SHHHHHHHHHH: ExpBur :eeebeeeeebbbbbbbeeeeeeebbbbbeebbeeeeebee----ebebebebbbbebebeebeebeeeeeeebebbebbeeeeeeeebeeeebbbbbbbb: queryA 492:LKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVT: 591 :****************************************************************************************************: 8tbx_A_1 288:LKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVT: 387 SecStr :HHHHHHHHHHHHHT S EEEE SSHHHHHHHHHHHHHTT BTTSTT TTBEEEESTTS HHHHHHHHHHHHTTSSSEEEE HHHHHH BSEEEESS: ExpBur :bbbbbbbebbeeeebeebbbbbebeeebebbbebbeeeebbeeeeeeebbbbbbbeebeeeeeeebbeebeeebbebbbbbeebbeebebeebbbbbbbb: queryA 592:LPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQV: 673 :**********************************************************************************: 8tbx_A_1 388:LPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQV: 469 SecStr : SSTHHHHHHHTTB TTS EEEEEEEESS EEEE STTTTTT SBGGGT SEEEE HHHHHHHHHHHTTS B : ExpBur :bbeeeebbeebbebbbeeeeebbbbbbbbeeebbbbeeeeeeeeeebeeebeeeeebbbeebebeebbeebbeebebebeee: |