CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(DDX1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [220 aa] | Probable ATP-dependent RNA helicase DDX47 :DDX47_HUMAN | |
2 | b | B 1 (A) | non-polymer(PO4) | PHOSPHATE ION | 325G 348G 349R 351D (identity: 100.0 %/39.2 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:3ber_A_1 identity=39.2% |
queryA 4:FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA: 103 :* ** * * ** ** * *** * * * *********** * ** : 3ber_A_1 45:FKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNALLET------------------------------------: 108 SecStr :TGGGT HHHHHHHHHTT S HHHHHHHHHHHTT EEEE TTS HHHHHHHHHHHHHHHS------------------------------------: ExpBur :beebebeeebbebbeeeeeeebebbbbbbbebbeeeebbbbbbeeebebbbbbbbbbbbbbeee------------------------------------: queryA 104:IGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHV: 203 : : 3ber_A_1 -1:----------------------------------------------------------------------------------------------------: -1 SecStr :----------------------------------------------------------------------------------------------------: ExpBur :----------------------------------------------------------------------------------------------------: queryA 204:KFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPK------ALIVEPSRE: 297 : ** * **: 3ber_A_1 109:-------------------------------------------------------------------------------------PQRLF-ALVLTPTRE: 122 SecStr :------------------------------------------------------------------------------------- SS -EEEE SSHH: ExpBur :-------------------------------------------------------------------------------------eeebb-bbbbbbeee: queryA 298:LAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQ: 393 :** * ** * ** * * * ***** * * * ** ** **** * ** : 3ber_A_1 123:LAFQI---SEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPR: 216 SecStr :HHHHH---HHHHHHHHGGGT EEEE TTS HHHHHHHHHT SEEEE HHHHHHHHHHSTT TT EEEE SHHHHHHTT HHHHHHHHHSS S: ExpBur :bbeeb---beebeebbeeeebebbebbeeeeeeebeeebeeebbbbbbbbeebbebeeebeebebeebebbbbbbbbebbeeebeeebeebbeebee: Contact : b bb b |