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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(DDX1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [381 aa] | Probable ATP-dependent RNA helicase p47 :UAP56_HUMAN | |
2 | b | B 1 (A) | non-polymer(IPA) | ISOPROPYL ALCOHOL | 579I(M) 584V 585P(N) 586Y(I) 587V(A) 603I(V) 605R 614L (identity: 37.5 %/33.8 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:1xti_A_1 identity=33.8% |
queryA 4:FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA: 103 :* ** * * * * ** * *** * * *** * * : 1xti_A_1 10:FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQ-----------------------------------------: 68 SecStr :GGGG HHHHHHHHHHS S HHHHHHHHHHTTT EEEE SS SSHHHHHHHHHHH-----------------------------------------: ExpBur :beebebeeebeebbeebeeeebbebbeebbeebbeeeebbbebeeebebbbbbbbbbbb-----------------------------------------: queryA 104:IGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHV: 203 : : 1xti_A_1 -1:----------------------------------------------------------------------------------------------------: -1 SecStr :----------------------------------------------------------------------------------------------------: ExpBur :----------------------------------------------------------------------------------------------------: queryA 204:KFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPK----------ALIVE: 293 : * : 1xti_A_1 69:-------------------------------------------------------------------------------------QLEPVTGQVSVLVMC: 83 SecStr :-------------------------------------------------------------------------------------H TT EEEE : ExpBur :-------------------------------------------------------------------------------------ebeeeeeebbbbbbb: queryA 294:PSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE-NGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIP: 392 : **** * * ** * * ** ** * ******** * *** *** * * * * * : 1xti_A_1 84:HTRELAFQISKEYERFSKYMPNVKVA--VFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLD---MRRDVQEIF: 178 SecStr :S HHHHHHHHHHHHHHTTT TT EE--EE TTS HHHHHHHHHHS SEEEE HHHHHHHHHTTSS TT SEEEE SHHHHTSSHH---HHHHHHHHH: ExpBur :eeeeebeebbebbebbbeebeebeeb--ebbeeeeeeebeeebeeebbbbbbbbbebbbebbeeeebebeebebbbbbbbbebbeeee---bbeebeebb: queryA 393:QVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-----HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSE: 487 : * * ** **** * * * * * * * * * * * * ** : 1xti_A_1 179:RMTPHEK--QVMMFSATL-SKEIRPVCRKFMQDPMEIFVDDETKL--TLHGLQQYYVKLKDNEKNRKLFDLL--------DVL-----------------: 248 SecStr :HTS SSS--EEEEEESS - STHHHHHHHH SS EEEE -- TT EEEEEE GGGHHHHHHHHH--------HHS-----------------: ExpBur :eebeeeb--bbbbbbeee-eeebeebbeebbeeebebebeeeeeb--ebeebebbbbebeeeebeeebbebb--------eeb-----------------: queryA 488:AIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV: 587 : * ** * * * * * * ** ** * * * ** ** * : 1xti_A_1 249:-----------------EFNQVVIFVKSVQRCIALAQLLVEQN---------FPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIA: 322 SecStr :----------------- SEEEEE S HHHHHHHHHHHHHTT--------- EEEE TTS HHHHHHHHHHHHTT SEEEES SS B TTEEEE: ExpBur :-----------------eeebbbbbbeeeebbeebbeebeeee---------bebbbbbeebeeeebbeebeebeeeeeebbbbbebeeebbebeebbbb: Contact : b bbbb queryA 588:INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE: 624 : * * * ** * ** **** * * : 1xti_A_1 323:FNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEND: 359 SecStr :EESS SSHHHHHHHH B SSS EEEEEE SHHH: ExpBur :bbbbbbeebebbbebbbbeeeebeebbbbbbbeeeeb: Contact : b b b |