CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
FOCUSED SITES | template(5jg8_B auth_asym_id:B) | ||||||
SiteNum | AA | label_ seq_id |
auth_ seq_id |
AA | Sec | Exp/Bur | RelAcc |
168 | G | 123 | 166 | G | b | 17.9 |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | |
1 | a | A(ASM_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [530 aa] | Sphingomyelin phosphodiesterase :ASM_HUMAN |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5jg8_B_1 identity=100.0% |
queryA 84:FGWGNLTCPICKGLFTAINLGLKKEPNVARVGSVAIKLCNLLKIAPPAVCQSIVHLFEDDMVEVWRRSVLSPSEACGLLLGSTCGHWDIFSSWNISLPTV: 183 :****************************************************************************************************: 5jg8_B_1 39:FGWGNLTCPICKGLFTAINLGLKKEPNVARVGSVAIKLCNLLKIAPPAVCQSIVHLFEDDMVEVWRRSVLSPSEACGLLLGSTCGHWDIFSSWNISLPTV: 138 SecStr : GGGTHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHH S HHHHHHHHHHHHHHHHHHHHHTTSSTTTHHHHHTBTTB TT SS: ExpBur :eeeeeeeeeebeeebeeebeebeeeeebeeebeeebeeeeeeeebeeebbeeebeebbebebebebebbeeebbbbbeeebeebbeeebeeebebeeeee: queryA 184:PKPPPKPPSPPAPGAPVSRILFLTDLHWDHDYLEGTDPDCADPLCCRRGSGLPPASRPGAGYWGEYSKCDLPLRTLESLLSGLGPAGPFDMVYWTGDIPA: 283 :****************************************************************************************************: 5jg8_B_1 139:PKPPPKPPSPPAPGAPVSRILFLTDLHWDHDYLEGTDPDCADPLCCRRGSGLPPASRPGAGYWGEYSKCDLPLRTLESLLSGLGPAGPFDMVYWTGDIPA: 238 SecStr : TT EEEEEEE B S B TTS SS SSSS SBTTS TT TT SSS B HHHHHHHHHTTSSS SEEEE B : ExpBur :eeeeeeeeeeeeeeeeebbbbbbbbbbbbeebeeebbbebeeebbbbeebeeeeeeeeebbebbbbeebbbbeebbebbbeebeeebebebbbbbbbbbb: queryA 284:HDVWHQTRQDQLRALTTVTALVRKFLGPVPVYPAVGNHESTPVNSFPPPFIEGNHSSRWLYEAMAKAWEPWLPAEALRTLRIGGFYALSPYPGLRLISLN: 383 :****************************************************************************************************: 5jg8_B_1 239:HDVWHQTRQDQLRALTTVTALVRKFLGPVPVYPAVGNHESTPVNSFPPPFIEGNHSSRWLYEAMAKAWEPWLPAEALRTLRIGGFYALSPYPGLRLISLN: 338 SecStr :S SS HHHHHHHHHHHHHHHHHHHTTS EEE SSSSSSTT TTS SSSSSHHHHHHTTTSSTTTS HHHHHHHHHTS EEE SSTTEEEEE : ExpBur :bbbbebeeeebeebbeebbebbeeebeeeebbbbbbbbbbbbbbbbbbeebeeeebbebbbebbbebbeebbeeebbebbeebbbbbbebbeebbbbbbb: queryA 384:MNFCSRENFWLLINSTDPAGQLQWLVGELQAAEDRGDKVHIIGHIPPGHCLKSWSWNYYRIVARYENTLAAQFFGHTHVDEFEVFYDEETLSRPLAVAFL: 483 :****************************************************************************************************: 5jg8_B_1 339:MNFCSRENFWLLINSTDPAGQLQWLVGELQAAEDRGDKVHIIGHIPPGHCLKSWSWNYYRIVARYENTLAAQFFGHTHVDEFEVFYDEETLSRPLAVAFL: 438 SecStr :GGGG SS GGGGT SSGGGHHHHHHHHHHHHHHHT EEEEEESS TTSS SHHHHHHHHHHHHTTTTEEEEEEEEEES EEEEEE TTTS SEEEEEEE: ExpBur :bbbbbeebbbbbbebebbeebbeebbebbbebbeeebebbbbbbbbbeebbebbbebbbebbbbbbebbbbbbbbbbbbbbbbbbbbeeebeebbbbbbb: queryA 484:APSATTYIGLNPGYRVYQIDGNYSGSSHVVLDHETYILNLTQANIPGAIPHWQLLYRARETYGLPNTLPTAWHNLVYRMRGDMQLFQTFWFLYHKGHPPS: 583 :****************************************************************************************************: 5jg8_B_1 439:APSATTYIGLNPGYRVYQIDGNYSGSSHVVLDHETYILNLTQANIPGAIPHWQLLYRARETYGLPNTLPTAWHNLVYRMRGDMQLFQTFWFLYHKGHPPS: 538 SecStr :EE SS TTT EEEEEEEE SSTT EEEEEEEEE HHHHTSTT EE BHHHHHT S SSHHHHHHHHHHHHH HHHHHHHHHHHTTT S: ExpBur :bbbbbbeeebbbbbbbbbbbbeeeebbbbbbbbbbbbbebeebeeeeeeeebeeebebeeebebeebebebbbebbeebeeeeebbeebbebbbbeeeee: queryA 584:EPCGTPCRLATLCAQLSARADSPALCRHLM: 613 :******************************: 5jg8_B_1 539:EPCGTPCRLATLCAQLSARADSPALCRHLM: 568 SecStr :S HHHHHHHHHHHH STT GGGGGGG : ExpBur :eebeeeebeebbeebbbbbbebeebbeebe: |